X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=help%2Fhtml%2Fmenus%2Falwview.html;h=53ae079702193aaf7cf8a4bc1d1d569a02d0d10c;hb=3b94f01f4edf56896ae3b5f0ce6cb4f1996e7bbc;hp=b252ff54e5f53216db257ea0aeafe0fdac678395;hpb=d423f22792e47dbc800ae220a58677f988971d06;p=jalview.git
diff --git a/help/html/menus/alwview.html b/help/html/menus/alwview.html
index b252ff5..53ae079 100755
--- a/help/html/menus/alwview.html
+++ b/help/html/menus/alwview.html
@@ -1,21 +1,21 @@
+-->
Alignment Window Menus
@@ -49,10 +49,15 @@
Enable or disable the display of the histogram above the consensus sequence.
- Show Consensus Profile
+ Show Consensus Logo
Enable or disable the display of the sequence logo above the consensus sequence.
-
+ Normalise Consensus Logo
+ When enabled, scales all logo stacks to the same height,
+ making it easier to compare symbol diversity in highly variable
+ regions.
+
+
Group Conservation
When ticked, display a conservation row for all groups (only available for protein alignments).