X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=help%2Fhtml%2Freleases.html;h=e16e1196371df1dff9327381443fa88f6c3b9829;hb=6905363d02254a557f93f66a2b69d85aa0b23696;hp=e37c5b56ee65fc249062962b3f41352d0307d6f2;hpb=caad315933db2600eaca9bf111932d5767ccb78b;p=jalview.git
diff --git a/help/html/releases.html b/help/html/releases.html
index e37c5b5..e16e119 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -9,17 +9,107 @@
Issues Resolved |
+ 2.2.1
+ 12/2/07 |
+
+ - Non standard characters can be read and displayed
+
- Annotations/Features can be imported/exported to the applet via textbox
+
- Applet allows editing of sequence/annotation/group name & description
+
- Preference setting to display sequence name in italics
+
- Annotation file format extended to allow Sequence_groups
+ to be defined
+
- Default opening of alignment overview panel can be specified in
+ preferences
+
- PDB residue numbering annotation added to associated sequences
+
|
+
+ - Applet crash under certain Linux OS with Java 1.6 installed
+
- Annotation file export / import bugs fixed
+
- PNG / EPS image output bugs fixed
|
+
+
+ 2.2
+ 27/11/06 |
+
+ - Multiple views on alignment
+
- Sequence feature editing
+
- "Reload" alignment
+
- "Save" to current filename
+
- Background dependent text colour
+
- Right align sequence ids
+
- User-defined lower case residue colours
+
- Format Menu
+
- Select Menu
+
- Menu item accelerator keys
+
- Control-V pastes to current alignment
+
- Cancel button for DAS Feature Fetching
+
- PCA and PDB Viewers zoom via mouse roller
+
- User-defined sub-tree colours and sub-tree selection
+
- 'New Window' button on the 'Output to Text box'
|
+
+ - New memory efficient Undo/Redo System
+
- Optimised symbol lookups and conservation/consensus calculations
+
- Region Conservation/Consensus recalculated after edits
+
- Fixed Remove Empty Columns Bug (empty columns at end of alignment)
+
- Slowed DAS Feature Fetching for increased robustness.
+
- Made angle brackets in ASCII feature descriptions display correctly
+
- Re-instated Zoom function for PCA
+
- Sequence descriptions conserved in web service analysis results
+
- Uniprot ID discoverer uses any word separated by ∣
+
- WsDbFetch query/result association resolved
+
- Tree leaf to sequence mapping improved
+
- Smooth fonts switch moved to FontChooser dialog box.
|
+
+
+ 2.1.1
+ 12/9/06 |
+
+ - Copy consensus sequence to clipboard
+ |
+
+ - Image output - rightmost residues are rendered if sequence id panel
+ has been resized
+ - Image output - all offscreen group boundaries are rendered
+ - Annotation files with sequence references - all elements in file are
+ relative to sequence position
+ - Mac Applet users can use Alt key for group editing
+ |
+
+
+ 2.1
+ 22/8/06 |
+
+ - MAFFT Multiple Alignment in default Web Service list
+ - DAS Feature fetching
+ - Hide sequences and columns
+ - Export Annotations and Features
+ - GFF file reading / writing
+ - Associate structures with sequences from local PDB files
+ - Add sequences to exisiting alignment
+ - Recently opened files / URL lists
+ - Applet can launch the full application
+ - Applet has transparency for features (Java 1.2 required)
+ - Applet has user defined colours parameter
+ - Applet can load sequences from parameter "sequencex"
+ |
+
+ - Redundancy Panel reinstalled in the Applet
+ - Monospaced font - EPS / rescaling bug fixed
+ - Annotation files with sequence references bug fixed
+ |
+
+
2.08.1
2/5/06 |
- Change case of selected region from Popup menu
- Choose to match case when searching
- - Middle mouse button and mouse movemnet can compress / expand the visible
+
- Middle mouse button and mouse movement can compress / expand the visible
width and height of the alignment
|
- Annotation Panel displays complete JNet results
- |
+
2.08b
|