X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=resources%2Flang%2FMessages.properties;h=775df570d24a22cb686c88c9967d246abbb98722;hb=73bbb197d06410544f7cc115e0d00e4456ed714a;hp=80f82cf4bc6fc8808c3f12d87dea16ad601f5a5b;hpb=4cea7a0328724b90a6a7c16ae8c926e0cc12cedd;p=jalview.git

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index 80f82cf..775df57 100644
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -132,6 +132,9 @@ action.group_link = Group Links
 action.show_chain = Show Chain
 action.show_group = Show Group
 action.fetch_db_references = Fetch DB References
+action.edit = Edit
+action.view_flanking_regions = Show flanking regions
+label.view_flanking_regions = Show sequence data either side of the subsequences involved in this alignment
 label.str = Str:
 label.seq = Seq:
 label.structures_manager = Structures Manager
@@ -162,6 +165,15 @@ label.redo_command = Redo {0}
 label.principal_component_analysis = Principal Component Analysis
 label.average_distance_identity = Average Distance Using % Identity
 label.neighbour_joining_identity = Neighbour Joining Using % Identity
+label.treecalc_title = {0} Using {1}
+label.tree_calc_av = Average Distance
+label.tree_calc_nj = Neighbour Joining
+label.select_score_model = Select score model
+label.score_model_pid = % Identity
+label.score_model_blosum62 = BLOSUM62
+label.score_model_pam250 = PAM 250
+label.score_model_conservation = Physicochemical property conservation
+label.score_model_enhconservation = Physicochemical property conservation
 label.status_bar = Status bar
 label.out_to_textbox = Output to Textbox
 label.clustalx = Clustalx
@@ -291,7 +303,7 @@ label.successfully_saved_to_file_in_format = Successfully saved to file: {0} in
 label.copied_sequences_to_clipboard = Copied {0} sequences to clipboard.
 label.check_file_matches_sequence_ids_alignment = Check that the file matches sequence IDs in the alignment.
 label.problem_reading_tcoffee_score_file = Problem reading T-COFFEE score file
-label.source_to_target = {0} to '{1}'
+label.source_to_target = {0} ... {1}
 label.per_sequence_only= Per-sequence only
 label.to_file = to File
 label.to_textbox = to Textbox
@@ -407,8 +419,8 @@ label.redundancy_threshold_selection = Redundancy threshold selection
 label.user_defined_colours = User defined colours
 label.jalviewLite_release = JalviewLite - Release {0}
 label.jaview_build_date = Build date: {0}
-label.jalview_authors_1 = Authors:  Jim Procter, Andrew Waterhouse, Jan Engelhardt, Lauren Lui,
-label.jalview_authors_2 = Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton.
+label.jalview_authors_1 = Authors: :  Jim Procter, Andrew Waterhouse, Lauren Lui, Jan Engelhardt, Natasha Sherstnev,
+label.jalview_authors_2 = Daniel Barton, Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton.
 label.jalview_dev_managers = Development managed by The Barton Group, University of Dundee, Scotland, UK.
 label.jalview_distribution_lists = For help, see the FAQ at www.jalview.org and/or join the jalview-discuss@jalview.org mailing list
 label.jalview_please_cite = If  you use Jalview, please cite:
@@ -433,6 +445,7 @@ label.calculating_tree = Calculating tree
 label.state_queueing = queuing
 label.state_running = running
 label.state_complete = complete
+label.state_completed = finished
 label.state_job_cancelled = job cancelled!!
 label.state_job_error = job error!
 label.server_error_try_later = Server Error! (try later)
@@ -615,6 +628,8 @@ label.2d_rna_sequence_name = 2D RNA - {0}
 label.edit_name_and_description_current_group = Edit name and description of current group.
 label.view_structure_for = View structure for {0}
 label.view_all_structures = View all {0} structures.
+label.view_all_representative_structures = View all {0} representative structures.
+label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = "Opens a new Jmol view with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment."
 label.associate_structure_with_sequence = Associate Structure with Sequence
 label.from_file = from file
 label.enter_pdb_id = Enter PDB Id
@@ -682,7 +697,7 @@ label.your_sequences_have_been_verified = Your sequences have been verified agai
 label.sequence_names_updated = Sequence names updated
 label.dbref_search_completed = DBRef search completed
 label.show_all_chains = Show all chains
-label.fetch_all_param = Fetch all '{0}'
+label.fetch_all_param = Fetch all {0}
 label.paste_new_window = Paste To New Window
 label.settings_for_param = Settings for {0}
 label.view_params = View {0}
@@ -719,4 +734,8 @@ label.example_query_param = Example query: {0}
 label.enter_value_increase_conservation_visibility = Enter value to increase conservation visibility
 label.enter_percentage_identity_above_which_colour_residues = Enter % identity above which to colour residues
 label.wswublast_client_credits = To display sequence features an exact Uniprot id with 100% sequence identity match must be entered.\nIn order to display these features, try changing the names of your sequences to the ids suggested below.\n\nRunning WSWUBlast at EBI.\nPlease quote Pillai S., Silventoinen V., Kallio K., Senger M., Sobhany S., Tate J., Velankar S., Golovin A., Henrick K., Rice P., Stoehr P., Lopez R.\nSOAP-based services provided by the European Bioinformatics Institute.\nNucleic Acids Res. 33(1):W25-W28 (2005));
-label.blasting_for_unidentified_sequence = BLASTing for unidentified sequences
\ No newline at end of file
+label.blasting_for_unidentified_sequence = BLASTing for unidentified sequences
+label.select_columns_containing = Select columns containing
+label.select_columns_not_containing = Select columns that do not contain
+option.trim_retrieved_seqs = Trim retrieved sequences
+label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences.