X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fappletgui%2FAlignFrame.java;h=062dbf8256d3d233be0fe82c88454e9fbaed9b9a;hb=refs%2Fheads%2FJAL-3437_load_project;hp=adfb8ca90abfb7530edf1a3a19b15a3510da2aa2;hpb=418006c3714eb8da78234660698231597eb90fb1;p=jalview.git

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index adfb8ca..062dbf8 100644
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -882,7 +882,7 @@ public class AlignFrame extends EmbmenuFrame implements AlignFrameI,
     }
     else if (source == autoCalculate)
     {
-      viewport.autoCalculateConsensus = autoCalculate.getState();
+      viewport.setAutoCalculateConsensusAndConservation(autoCalculate.getState());
     }
     else if (source == sortByTree)
     {