X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fappletgui%2FFinder.java;h=2993fdb49782170963bc35e7d2815b4e603cd344;hb=78f929d85e95b6445f7fab46504abc394d8c3fe9;hp=4ca59c9ff5b800d3ec3e180c4abd20c0c1c77f23;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git

diff --git a/src/jalview/appletgui/Finder.java b/src/jalview/appletgui/Finder.java
index 4ca59c9..2993fdb 100755
--- a/src/jalview/appletgui/Finder.java
+++ b/src/jalview/appletgui/Finder.java
@@ -115,14 +115,14 @@ public class Finder extends Panel implements ActionListener
 
   void doSearch(boolean findAll)
   {
-    if (jalview.bin.JalviewLite.currentAlignFrame != null)
+    if (ap.av.applet.currentAlignFrame != null)
     {
-      ap = jalview.bin.JalviewLite.currentAlignFrame.alignPanel;
+      ap = ap.av.applet.currentAlignFrame.alignPanel;
       av = ap.av;
     }
     createNewGroup.setEnabled(false);
-    jalview.analysis.Finder finder = new jalview.analysis.Finder(av
-            .getAlignment(), av.getSelectionGroup(), seqIndex, resIndex);
+    jalview.analysis.Finder finder = new jalview.analysis.Finder(
+            av.getAlignment(), av.getSelectionGroup(), seqIndex, resIndex);
     finder.setCaseSensitive(caseSensitive.getState());
     finder.setFindAll(findAll);