X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fgui%2FAlignViewport.java;h=92c6355a65c2137c3a1378621fd621ad926236dc;hb=e4c2aac5d24da467eba0fcb27fe2d67f090a99bf;hp=8378f30b1711e16130610d43fdde941165c1fd03;hpb=4d7f98a6dd54d9863ba449ec79dcd95d25ed863d;p=jalview.git

diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java
index 8378f30..92c6355 100644
--- a/src/jalview/gui/AlignViewport.java
+++ b/src/jalview/gui/AlignViewport.java
@@ -926,7 +926,7 @@ public class AlignViewport extends AlignmentViewport implements
      * is a pre-requisite for building mappings.
      */
     al.setDataset(null);
-    AlignmentUtils.mapProteinToCdna(protein, cdna);
+    AlignmentUtils.mapProteinAlignmentToCdna(protein, cdna);
 
     /*
      * Create the AlignFrame for the added alignment. If it is protein, mappings
@@ -1072,7 +1072,7 @@ public class AlignViewport extends AlignmentViewport implements
       // TODO would like next line without cast but needs more refactoring...
       final AlignmentPanel complementPanel = ((AlignViewport) getCodingComplement())
               .getAlignPanel();
-      complementPanel.setFollowingComplementScroll(true);
+      complementPanel.setDontScrollComplement(true);
       complementPanel.scrollToCentre(sr, verticalOffset);
     }
   }