X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fgui%2FAnnotationColourChooser.java;h=31c7ba7cad7912d4c2948227eea17f08babda588;hb=c54ce58a000089a3f45f5978dd10ed41bfedfc4f;hp=ba76858d39d049f526df041f1b5393585365fa8b;hpb=7bc226b58110fa26d9dbd3f0c78095d06909ffc3;p=jalview.git

diff --git a/src/jalview/gui/AnnotationColourChooser.java b/src/jalview/gui/AnnotationColourChooser.java
index ba76858..31c7ba7 100755
--- a/src/jalview/gui/AnnotationColourChooser.java
+++ b/src/jalview/gui/AnnotationColourChooser.java
@@ -39,7 +39,7 @@ public class AnnotationColourChooser
   jalview.datamodel.AlignmentAnnotation currentAnnotation;
   boolean adjusting = false;
 
-  public AnnotationColourChooser(AlignViewport av, AlignmentPanel ap)
+  public AnnotationColourChooser(AlignViewport av, final AlignmentPanel ap)
   {
     oldcs = av.getGlobalColourScheme();
     if (av.alignment.getGroups() != null)
@@ -81,6 +81,13 @@ public class AnnotationColourChooser
         }
       }
     });
+    slider.addMouseListener(new MouseAdapter()
+        {
+          public void mouseReleased(MouseEvent evt)
+          {
+            ap.paintAlignment(true);
+          }
+        });
 
     if (av.alignment.getAlignmentAnnotation() == null)
     {
@@ -405,7 +412,7 @@ public class AnnotationColourChooser
       }
     }
 
-    ap.repaint();
+    ap.paintAlignment(false);
   }
 
   public void ok_actionPerformed(ActionEvent e)
@@ -480,7 +487,7 @@ public class AnnotationColourChooser
     }
 
     currentAnnotation.threshold.value = (float) slider.getValue() / 1000f;
-    ap.repaint();
+    ap.paintAlignment(false);
   }
 
   public void currentColours_actionPerformed(ActionEvent e)