X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fio%2FJalviewFileView.java;h=4cef26df57dda9dfc61b1ebe5e830b519205f9cc;hb=8b5ec42b22c5f0cd5e8b34823c60c84a27a9763b;hp=82d0061994bfd9a54340891b9556e5eaa38f4f2d;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git
diff --git a/src/jalview/io/JalviewFileView.java b/src/jalview/io/JalviewFileView.java
index 82d0061..4cef26d 100755
--- a/src/jalview/io/JalviewFileView.java
+++ b/src/jalview/io/JalviewFileView.java
@@ -1,27 +1,31 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.io;
-import java.io.*;
-import java.util.*;
+import java.io.File;
+import java.util.Hashtable;
-import javax.swing.*;
-import javax.swing.filechooser.*;
+import javax.swing.Icon;
+import javax.swing.ImageIcon;
+import javax.swing.filechooser.FileView;
public class JalviewFileView extends FileView
{
@@ -29,15 +33,24 @@ public class JalviewFileView extends FileView
static
{
+ // TODO: these names should come from the FormatAdapter lists for
+ // readable/writable extensions
+ alignSuffix.put("amsa", "AMSA file");
alignSuffix.put("fasta", "Fasta file");
alignSuffix.put("fa", "Fasta file");
alignSuffix.put("fastq", "Fasta file");
+ alignSuffix.put("mfa", "Fasta file");
alignSuffix.put("blc", "BLC file");
alignSuffix.put("msf", "MSF file");
alignSuffix.put("pfam", "PFAM file");
alignSuffix.put("aln", "Clustal file");
alignSuffix.put("pir", "PIR file");
- alignSuffix.put("jar", "Jalview file");
+ alignSuffix.put("jar", "Jalview Project file (old)");
+ alignSuffix.put("jvp", "Jalview Project file");
+ alignSuffix.put("amsa", "AMSA file");
+ alignSuffix.put("sto", "Stockholm File");
+ alignSuffix.put("stk", "Stockholm File");
+ alignSuffix.put("sto", "Stockholm File");
}
public String getTypeDescription(File f)