X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fio%2FMatrixFile.java;h=1aa87a5f99d3864c4bdbcec2d7ad114859a5d5b5;hb=0b9d0f8eba1cec46c0b31fdd402a826e26244ff5;hp=5b9e79f52ef50efc64968aa8a0ab672f431c129b;hpb=aa81abb776b73442af871aec2350b5721405f194;p=jalview.git diff --git a/src/jalview/io/MatrixFile.java b/src/jalview/io/MatrixFile.java index 5b9e79f..1aa87a5 100644 --- a/src/jalview/io/MatrixFile.java +++ b/src/jalview/io/MatrixFile.java @@ -1,22 +1,34 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) + * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + */ package jalview.io; import java.io.IOException; /** - * IO for asymmetric matrix with arbitrary dimension - * with labels, as displayed by PCA viewer. - * Form is: tab separated entity defs - * header line - * TITLE\ttitle - * DESC\tdesc - * PROPERTY\t\tname\ttype\tvalue + * IO for asymmetric matrix with arbitrary dimension with labels, as displayed + * by PCA viewer. Form is: tab separated entity defs header line TITLE\ttitle + * DESC\tdesc PROPERTY\t\tname\ttype\tvalue * ROW\tRow i label (ID)/tPrinciple text/tprinciple description/t... - * COLUMN\t(similar, optional).. - * .. - * \t...(column-wise data for row i) + * COLUMN\t(similar, optional).. .. \t...(column-wise data for row + * i) */ - + public class MatrixFile extends FileParse -{ - +{ + }