X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fschemes%2FConservationColourScheme.java;h=ab5a8083e19da4f1106fad4dd5cc16632d2571ad;hb=ff3c6d412fe13784cde1e15a12567d6537f4151c;hp=7acc7226c04b7d0dab255b08a49416ec5b2566c3;hpb=342dfe93ddf709ca224f07686cf1032b82e93d70;p=jalview.git

diff --git a/src/jalview/schemes/ConservationColourScheme.java b/src/jalview/schemes/ConservationColourScheme.java
index 7acc722..ab5a808 100755
--- a/src/jalview/schemes/ConservationColourScheme.java
+++ b/src/jalview/schemes/ConservationColourScheme.java
@@ -67,7 +67,7 @@ public class ConservationColourScheme extends ResidueColourScheme {
 
       seq.setColor(c);
   }
-   public Color findColour(SequenceI seq, String s, int i, java.util.Vector whatever)
+   public Color findColour(String s, int i, java.util.Vector whatever)
    {
      Color c = null;
      if (colourThreshold > 0 && conserve.getConsSequence() != null)
@@ -105,7 +105,7 @@ public class ConservationColourScheme extends ResidueColourScheme {
    }
 
   public Color findColour(DrawableSequence seq, String s, int j) {
-    return cs.findColour(null, s, -1, null);
+    return cs.findColour( s, -1, null);
   }
   public boolean fullConservation(int j) {
     String tmp = conserve.getConsSequence().getSequence().substring(j,j+1);