X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fws%2FAWsJob.java;h=ed88ea96dbb8305eadc38b8bc49542740323adf4;hb=ab58313e7bb31264ddb2715a1c548cdc789d7fa6;hp=91f9644a5fa82a79ccd28c51b97510264b246ad1;hpb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;p=jalview.git
diff --git a/src/jalview/ws/AWsJob.java b/src/jalview/ws/AWsJob.java
index 91f9644..ed88ea9 100644
--- a/src/jalview/ws/AWsJob.java
+++ b/src/jalview/ws/AWsJob.java
@@ -1,23 +1,33 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.ws;
+import jalview.analysis.SeqsetUtils.SequenceInfo;
+import jalview.ws.params.ArgumentI;
+import jalview.ws.params.WsParamSetI;
+
+import java.util.Hashtable;
+import java.util.List;
+import java.util.Map;
+
/**
* Generic properties for an individual job within a Web Service Client thread.
* Derived from jalview web services version 1 statuses, and revised for Jws2.
@@ -143,6 +153,12 @@ public abstract class AWsJob
*/
protected boolean subjobComplete = false;
+ protected WsParamSetI preset = null;
+
+ protected List arguments = null;
+
+ protected Hashtable SeqNames = new Hashtable();
+
public AWsJob()
{
}
@@ -225,4 +241,47 @@ public abstract class AWsJob
String state = "";
return state;
}
+
+ public void setPreset(WsParamSetI jobpreset)
+ {
+ preset = jobpreset;
+ }
+
+ public void setArguments(List paramset)
+ {
+ arguments = paramset;
+
+ }
+
+ public boolean isPresetJob()
+ {
+ return preset!=null && arguments==null;
+ }
+
+ public List getArguments()
+ {
+ return arguments;
+ }
+
+ public WsParamSetI getPreset()
+ {
+ return preset;
+ }
+
+ long nextChunk = 0;
+
+ /**
+ * update the record of the last position in the log file read for this job
+ *
+ * @param nextChunk
+ */
+ public void setnextChunk(long nextChunk)
+ {
+ this.nextChunk = nextChunk;
+ }
+
+ public long getNextChunk()
+ {
+ return nextChunk;
+ }
}