X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fws%2Fjws2%2FJabaPreset.java;h=8586d245469c7481344fa8730750018afc722d51;hb=26e4caf025740afea870ed6ceb5894bc56316ba6;hp=1f8517e65656a0bfb4f98b4e708b6192ccfb1b9d;hpb=85037c7f026acf289a22eaf0bd0d368351b5905e;p=jalview.git
diff --git a/src/jalview/ws/jws2/JabaPreset.java b/src/jalview/ws/jws2/JabaPreset.java
index 1f8517e..8586d24 100644
--- a/src/jalview/ws/jws2/JabaPreset.java
+++ b/src/jalview/ws/jws2/JabaPreset.java
@@ -1,3 +1,20 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ */
package jalview.ws.jws2;
import jalview.ws.jws2.Jws2Discoverer.Jws2Instance;
@@ -8,58 +25,73 @@ import java.util.List;
import compbio.metadata.Preset;
-public class JabaPreset implements WsParamSetI {
- Preset p=null;
+public class JabaPreset implements WsParamSetI
+{
+ Preset p = null;
+
Jws2Instance service;
- public JabaPreset(Jws2Instance svc, Preset preset) {
- service=svc;
- p=preset;
+
+ public JabaPreset(Jws2Instance svc, Preset preset)
+ {
+ service = svc;
+ p = preset;
}
+
@Override
public String getName()
{
return p.getName();
}
+
@Override
public String getDescription()
{
return p.getDescription();
}
+
@Override
public String[] getApplicableUrls()
{
- return new String[] { service.getHost()};
+ return new String[]
+ { service.getUri() };
}
+
@Override
public String getSourceFile()
{
return null;
}
+
@Override
public boolean isModifiable()
{
return false;
}
+
@Override
public void setSourceFile(String newfile)
{
- throw new Error("Cannot set source file for "+getClass());
+ throw new Error("Cannot set source file for " + getClass());
}
+
@Override
public List getArguments()
{
- try {
- return JabaParamStore.getJwsArgsfromJaba(p.getArguments(service.getRunnerConfig()));
- }
- catch (Exception e)
+ try
+ {
+ return JabaParamStore.getJwsArgsfromJaba(p.getArguments(service
+ .getRunnerConfig()));
+ } catch (Exception e)
{
e.printStackTrace();
- throw new Error("Probable mismatch between service instance and preset!");
+ throw new Error(
+ "Probable mismatch between service instance and preset!");
}
}
+
@Override
public void setArguments(List args)
{
- throw new Error("Cannot set Parameters for a Jaba Web service's preset");
+ throw new Error("Cannot set Parameters for a Jaba Web service's preset");
}
-}
\ No newline at end of file
+}