X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=src%2Fjalview%2Fxml%2Fbinding%2Fjalview%2FJalviewUserColours.java;h=e4b160fe64058b37916fd6dcd7ffe836eda45812;hb=7b5d11bce39b76612773aa4d606ffbe55bb86a02;hp=0de2ac08bc1cf1c56add319313f440d500ecc201;hpb=ce7259404dbb5bbeeb296d32b6a2543b30a7c924;p=jalview.git diff --git a/src/jalview/xml/binding/jalview/JalviewUserColours.java b/src/jalview/xml/binding/jalview/JalviewUserColours.java index 0de2ac0..e4b160f 100644 --- a/src/jalview/xml/binding/jalview/JalviewUserColours.java +++ b/src/jalview/xml/binding/jalview/JalviewUserColours.java @@ -2,10 +2,9 @@ // This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 // See http://java.sun.com/xml/jaxb // Any modifications to this file will be lost upon recompilation of the source schema. -// Generated on: 2018.09.28 at 12:18:54 PM BST +// Generated on: 2023.05.13 at 06:58:41 PM BST // - package jalview.xml.binding.jalview; import java.util.ArrayList; @@ -16,11 +15,13 @@ import javax.xml.bind.annotation.XmlAttribute; import javax.xml.bind.annotation.XmlElement; import javax.xml.bind.annotation.XmlType; - /** - *
Java class for JalviewUserColours complex type. + *
+ * Java class for JalviewUserColours complex type. * - *
The following schema fragment specifies the expected content contained within this class. + *
+ * The following schema fragment specifies the expected content contained within + * this class. * *
* <complexType name="JalviewUserColours"> @@ -71,542 +72,556 @@ import javax.xml.bind.annotation.XmlType; * */ @XmlAccessorType(XmlAccessType.FIELD) -@XmlType(name = "JalviewUserColours", namespace = "www.jalview.org/colours", propOrder = { - "version", - "colour", - "filter" -}) -public class JalviewUserColours { - - @XmlElement(name = "Version", namespace = "") - protected String version; - @XmlElement(namespace = "") - protected Listcolour; +@XmlType( + name = "JalviewUserColours", + namespace = "www.jalview.org/colours", + propOrder = + { "version", "colour", "filter" }) +public class JalviewUserColours +{ + + @XmlElement(name = "Version", namespace = "") + protected String version; + + @XmlElement(namespace = "") + protected List colour; + + @XmlElement(namespace = "") + protected List filter; + + @XmlAttribute(name = "schemeName") + protected String schemeName; + + /** + * Gets the value of the version property. + * + * @return possible object is {@link String } + * + */ + public String getVersion() + { + return version; + } + + /** + * Sets the value of the version property. + * + * @param value + * allowed object is {@link String } + * + */ + public void setVersion(String value) + { + this.version = value; + } + + /** + * Gets the value of the colour property. + * + * + * This accessor method returns a reference to the live list, not a snapshot. + * Therefore any modification you make to the returned list will be present + * inside the JAXB object. This is why there is not a
set
method + * for the colour property. + * + *+ * For example, to add a new item, do as follows: + * + *
+ * getColour().add(newItem); + *+ * + * + *+ * Objects of the following type(s) are allowed in the list + * {@link JalviewUserColours.Colour } + * + * + */ + public List
getColour() + { + if (colour == null) + { + colour = new ArrayList (); + } + return this.colour; + } + + /** + * Gets the value of the filter property. + * + * + * This accessor method returns a reference to the live list, not a snapshot. + * Therefore any modification you make to the returned list will be present + * inside the JAXB object. This is why there is not a
set
method + * for the filter property. + * + *+ * For example, to add a new item, do as follows: + * + *
+ * getFilter().add(newItem); + *+ * + * + *+ * Objects of the following type(s) are allowed in the list + * {@link JalviewUserColours.Filter } + * + * + */ + public List
getFilter() + { + if (filter == null) + { + filter = new ArrayList (); + } + return this.filter; + } + + /** + * Gets the value of the schemeName property. + * + * @return possible object is {@link String } + * + */ + public String getSchemeName() + { + return schemeName; + } + + /** + * Sets the value of the schemeName property. + * + * @param value + * allowed object is {@link String } + * + */ + public void setSchemeName(String value) + { + this.schemeName = value; + } + + /** + * + * Java class for anonymous complex type. + * + *
+ * The following schema fragment specifies the expected content contained + * within this class. + * + *
+ * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="attributeName" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="2" minOccurs="0"/> + * </sequence> + * <attribute name="Name" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="RGB" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="minRGB" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="noValueColour" type="{www.jalview.org/colours}NoValueColour" default="Min" /> + * <attribute name="threshType" type="{www.jalview.org/colours}ThresholdType" /> + * <attribute name="threshold" type="{http://www.w3.org/2001/XMLSchema}float" /> + * <attribute name="max" type="{http://www.w3.org/2001/XMLSchema}float" /> + * <attribute name="min" type="{http://www.w3.org/2001/XMLSchema}float" /> + * <attribute name="colourByLabel" type="{http://www.w3.org/2001/XMLSchema}boolean" /> + * <attribute name="autoScale" type="{http://www.w3.org/2001/XMLSchema}boolean" /> + * </restriction> + * </complexContent> + * </complexType> + *+ * + * + */ + @XmlAccessorType(XmlAccessType.FIELD) + @XmlType(name = "", propOrder = { "attributeName" }) + public static class Colour + { + @XmlElement(namespace = "") - protected Listfilter; - @XmlAttribute(name = "schemeName") - protected String schemeName; + protected List attributeName; + + @XmlAttribute(name = "Name") + protected String name; + + @XmlAttribute(name = "RGB", required = true) + protected String rgb; + + @XmlAttribute(name = "minRGB") + protected String minRGB; + + @XmlAttribute(name = "noValueColour") + protected NoValueColour noValueColour; + + @XmlAttribute(name = "threshType") + protected ThresholdType threshType; + + @XmlAttribute(name = "threshold") + protected Float threshold; + + @XmlAttribute(name = "max") + protected Float max; + + @XmlAttribute(name = "min") + protected Float min; + + @XmlAttribute(name = "colourByLabel") + protected Boolean colourByLabel; + + @XmlAttribute(name = "autoScale") + protected Boolean autoScale; /** - * Gets the value of the version property. + * Gets the value of the attributeName property. + * + * + * This accessor method returns a reference to the live list, not a + * snapshot. Therefore any modification you make to the returned list will + * be present inside the JAXB object. This is why there is not a + *
set
method for the attributeName property. + * + *+ * For example, to add a new item, do as follows: + * + *
+ * getAttributeName().add(newItem); + *+ * + * + *+ * Objects of the following type(s) are allowed in the list {@link String } + * * - * @return - * possible object is - * {@link String } - * */ - public String getVersion() { - return version; + public List
getAttributeName() + { + if (attributeName == null) + { + attributeName = new ArrayList (); + } + return this.attributeName; } /** - * Sets the value of the version property. + * Gets the value of the name property. + * + * @return possible object is {@link String } + * + */ + public String getName() + { + return name; + } + + /** + * Sets the value of the name property. * * @param value - * allowed object is - * {@link String } - * + * allowed object is {@link String } + * */ - public void setVersion(String value) { - this.version = value; + public void setName(String value) + { + this.name = value; } /** - * Gets the value of the colour property. + * Gets the value of the rgb property. * - * - * This accessor method returns a reference to the live list, - * not a snapshot. Therefore any modification you make to the - * returned list will be present inside the JAXB object. - * This is why there is not a
set
method for the colour property. + * @return possible object is {@link String } * - *- * For example, to add a new item, do as follows: - *
- * getColour().add(newItem); - *+ */ + public String getRGB() + { + return rgb; + } + + /** + * Sets the value of the rgb property. * + * @param value + * allowed object is {@link String } * - *- * Objects of the following type(s) are allowed in the list - * {@link JalviewUserColours.Colour } + */ + public void setRGB(String value) + { + this.rgb = value; + } + + /** + * Gets the value of the minRGB property. * + * @return possible object is {@link String } * */ - public List
getColour() { - if (colour == null) { - colour = new ArrayList (); - } - return this.colour; + public String getMinRGB() + { + return minRGB; } /** - * Gets the value of the filter property. + * Sets the value of the minRGB property. * - * - * This accessor method returns a reference to the live list, - * not a snapshot. Therefore any modification you make to the - * returned list will be present inside the JAXB object. - * This is why there is not a
set
method for the filter property. + * @param value + * allowed object is {@link String } * - *- * For example, to add a new item, do as follows: - *
- * getFilter().add(newItem); - *+ */ + public void setMinRGB(String value) + { + this.minRGB = value; + } + + /** + * Gets the value of the noValueColour property. * + * @return possible object is {@link NoValueColour } * - *- * Objects of the following type(s) are allowed in the list - * {@link JalviewUserColours.Filter } + */ + public NoValueColour getNoValueColour() + { + if (noValueColour == null) + { + return NoValueColour.MIN; + } + else + { + return noValueColour; + } + } + + /** + * Sets the value of the noValueColour property. * + * @param value + * allowed object is {@link NoValueColour } * */ - public List
getFilter() { - if (filter == null) { - filter = new ArrayList (); - } - return this.filter; + public void setNoValueColour(NoValueColour value) + { + this.noValueColour = value; } /** - * Gets the value of the schemeName property. + * Gets the value of the threshType property. + * + * @return possible object is {@link ThresholdType } * - * @return - * possible object is - * {@link String } - * */ - public String getSchemeName() { - return schemeName; + public ThresholdType getThreshType() + { + return threshType; } /** - * Sets the value of the schemeName property. + * Sets the value of the threshType property. * * @param value - * allowed object is - * {@link String } - * + * allowed object is {@link ThresholdType } + * */ - public void setSchemeName(String value) { - this.schemeName = value; + public void setThreshType(ThresholdType value) + { + this.threshType = value; } + /** + * Gets the value of the threshold property. + * + * @return possible object is {@link Float } + * + */ + public Float getThreshold() + { + return threshold; + } /** - * Java class for anonymous complex type. + * Sets the value of the threshold property. * - *
The following schema fragment specifies the expected content contained within this class. + * @param value + * allowed object is {@link Float } * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="attributeName" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="2" minOccurs="0"/> - * </sequence> - * <attribute name="Name" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="RGB" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="minRGB" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="noValueColour" type="{www.jalview.org/colours}NoValueColour" default="Min" /> - * <attribute name="threshType" type="{www.jalview.org/colours}ThresholdType" /> - * <attribute name="threshold" type="{http://www.w3.org/2001/XMLSchema}float" /> - * <attribute name="max" type="{http://www.w3.org/2001/XMLSchema}float" /> - * <attribute name="min" type="{http://www.w3.org/2001/XMLSchema}float" /> - * <attribute name="colourByLabel" type="{http://www.w3.org/2001/XMLSchema}boolean" /> - * <attribute name="autoScale" type="{http://www.w3.org/2001/XMLSchema}boolean" /> - * </restriction> - * </complexContent> - * </complexType> - *+ */ + public void setThreshold(Float value) + { + this.threshold = value; + } + + /** + * Gets the value of the max property. + * + * @return possible object is {@link Float } + * + */ + public Float getMax() + { + return max; + } + + /** + * Sets the value of the max property. + * + * @param value + * allowed object is {@link Float } + * + */ + public void setMax(Float value) + { + this.max = value; + } + + /** + * Gets the value of the min property. * + * @return possible object is {@link Float } * */ - @XmlAccessorType(XmlAccessType.FIELD) - @XmlType(name = "", propOrder = { - "attributeName" - }) - public static class Colour { - - @XmlElement(namespace = "") - protected ListattributeName; - @XmlAttribute(name = "Name") - protected String name; - @XmlAttribute(name = "RGB", required = true) - protected String rgb; - @XmlAttribute(name = "minRGB") - protected String minRGB; - @XmlAttribute(name = "noValueColour") - protected NoValueColour noValueColour; - @XmlAttribute(name = "threshType") - protected ThresholdType threshType; - @XmlAttribute(name = "threshold") - protected Float threshold; - @XmlAttribute(name = "max") - protected Float max; - @XmlAttribute(name = "min") - protected Float min; - @XmlAttribute(name = "colourByLabel") - protected Boolean colourByLabel; - @XmlAttribute(name = "autoScale") - protected Boolean autoScale; - - /** - * Gets the value of the attributeName property. - * - * - * This accessor method returns a reference to the live list, - * not a snapshot. Therefore any modification you make to the - * returned list will be present inside the JAXB object. - * This is why there is not a
set
method for the attributeName property. - * - *- * For example, to add a new item, do as follows: - *
- * getAttributeName().add(newItem); - *- * - * - *- * Objects of the following type(s) are allowed in the list - * {@link String } - * - * - */ - public List
getAttributeName() { - if (attributeName == null) { - attributeName = new ArrayList (); - } - return this.attributeName; - } - - /** - * Gets the value of the name property. - * - * @return - * possible object is - * {@link String } - * - */ - public String getName() { - return name; - } - - /** - * Sets the value of the name property. - * - * @param value - * allowed object is - * {@link String } - * - */ - public void setName(String value) { - this.name = value; - } - - /** - * Gets the value of the rgb property. - * - * @return - * possible object is - * {@link String } - * - */ - public String getRGB() { - return rgb; - } - - /** - * Sets the value of the rgb property. - * - * @param value - * allowed object is - * {@link String } - * - */ - public void setRGB(String value) { - this.rgb = value; - } - - /** - * Gets the value of the minRGB property. - * - * @return - * possible object is - * {@link String } - * - */ - public String getMinRGB() { - return minRGB; - } - - /** - * Sets the value of the minRGB property. - * - * @param value - * allowed object is - * {@link String } - * - */ - public void setMinRGB(String value) { - this.minRGB = value; - } - - /** - * Gets the value of the noValueColour property. - * - * @return - * possible object is - * {@link NoValueColour } - * - */ - public NoValueColour getNoValueColour() { - if (noValueColour == null) { - return NoValueColour.MIN; - } else { - return noValueColour; - } - } - - /** - * Sets the value of the noValueColour property. - * - * @param value - * allowed object is - * {@link NoValueColour } - * - */ - public void setNoValueColour(NoValueColour value) { - this.noValueColour = value; - } - - /** - * Gets the value of the threshType property. - * - * @return - * possible object is - * {@link ThresholdType } - * - */ - public ThresholdType getThreshType() { - return threshType; - } - - /** - * Sets the value of the threshType property. - * - * @param value - * allowed object is - * {@link ThresholdType } - * - */ - public void setThreshType(ThresholdType value) { - this.threshType = value; - } - - /** - * Gets the value of the threshold property. - * - * @return - * possible object is - * {@link Float } - * - */ - public Float getThreshold() { - return threshold; - } - - /** - * Sets the value of the threshold property. - * - * @param value - * allowed object is - * {@link Float } - * - */ - public void setThreshold(Float value) { - this.threshold = value; - } - - /** - * Gets the value of the max property. - * - * @return - * possible object is - * {@link Float } - * - */ - public Float getMax() { - return max; - } - - /** - * Sets the value of the max property. - * - * @param value - * allowed object is - * {@link Float } - * - */ - public void setMax(Float value) { - this.max = value; - } - - /** - * Gets the value of the min property. - * - * @return - * possible object is - * {@link Float } - * - */ - public Float getMin() { - return min; - } - - /** - * Sets the value of the min property. - * - * @param value - * allowed object is - * {@link Float } - * - */ - public void setMin(Float value) { - this.min = value; - } - - /** - * Gets the value of the colourByLabel property. - * - * @return - * possible object is - * {@link Boolean } - * - */ - public Boolean isColourByLabel() { - return colourByLabel; - } - - /** - * Sets the value of the colourByLabel property. - * - * @param value - * allowed object is - * {@link Boolean } - * - */ - public void setColourByLabel(Boolean value) { - this.colourByLabel = value; - } - - /** - * Gets the value of the autoScale property. - * - * @return - * possible object is - * {@link Boolean } - * - */ - public Boolean isAutoScale() { - return autoScale; - } - - /** - * Sets the value of the autoScale property. - * - * @param value - * allowed object is - * {@link Boolean } - * - */ - public void setAutoScale(Boolean value) { - this.autoScale = value; - } + public Float getMin() + { + return min; + } + /** + * Sets the value of the min property. + * + * @param value + * allowed object is {@link Float } + * + */ + public void setMin(Float value) + { + this.min = value; } + /** + * Gets the value of the colourByLabel property. + * + * @return possible object is {@link Boolean } + * + */ + public Boolean isColourByLabel() + { + return colourByLabel; + } /** - * Java class for anonymous complex type. + * Sets the value of the colourByLabel property. * - *
The following schema fragment specifies the expected content contained within this class. + * @param value + * allowed object is {@link Boolean } * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="matcherSet" type="{www.jalview.org/colours}FeatureMatcherSet"/> - * </sequence> - * <attribute name="featureType" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> - * </restriction> - * </complexContent> - * </complexType> - *+ */ + public void setColourByLabel(Boolean value) + { + this.colourByLabel = value; + } + + /** + * Gets the value of the autoScale property. + * + * @return possible object is {@link Boolean } + * + */ + public Boolean isAutoScale() + { + return autoScale; + } + + /** + * Sets the value of the autoScale property. + * + * @param value + * allowed object is {@link Boolean } + * + */ + public void setAutoScale(Boolean value) + { + this.autoScale = value; + } + + } + + /** + *+ * Java class for anonymous complex type. + * + *
+ * The following schema fragment specifies the expected content contained + * within this class. + * + *
+ * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="matcherSet" type="{www.jalview.org/colours}FeatureMatcherSet"/> + * </sequence> + * <attribute name="featureType" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> + * </restriction> + * </complexContent> + * </complexType> + *+ * + * + */ + @XmlAccessorType(XmlAccessType.FIELD) + @XmlType(name = "", propOrder = { "matcherSet" }) + public static class Filter + { + + @XmlElement(namespace = "", required = true) + protected FeatureMatcherSet matcherSet; + + @XmlAttribute(name = "featureType", required = true) + protected String featureType; + + /** + * Gets the value of the matcherSet property. + * + * @return possible object is {@link FeatureMatcherSet } + * + */ + public FeatureMatcherSet getMatcherSet() + { + return matcherSet; + } + + /** + * Sets the value of the matcherSet property. + * + * @param value + * allowed object is {@link FeatureMatcherSet } + * + */ + public void setMatcherSet(FeatureMatcherSet value) + { + this.matcherSet = value; + } + + /** + * Gets the value of the featureType property. * + * @return possible object is {@link String } * */ - @XmlAccessorType(XmlAccessType.FIELD) - @XmlType(name = "", propOrder = { - "matcherSet" - }) - public static class Filter { - - @XmlElement(namespace = "", required = true) - protected FeatureMatcherSet matcherSet; - @XmlAttribute(name = "featureType", required = true) - protected String featureType; - - /** - * Gets the value of the matcherSet property. - * - * @return - * possible object is - * {@link FeatureMatcherSet } - * - */ - public FeatureMatcherSet getMatcherSet() { - return matcherSet; - } - - /** - * Sets the value of the matcherSet property. - * - * @param value - * allowed object is - * {@link FeatureMatcherSet } - * - */ - public void setMatcherSet(FeatureMatcherSet value) { - this.matcherSet = value; - } - - /** - * Gets the value of the featureType property. - * - * @return - * possible object is - * {@link String } - * - */ - public String getFeatureType() { - return featureType; - } - - /** - * Sets the value of the featureType property. - * - * @param value - * allowed object is - * {@link String } - * - */ - public void setFeatureType(String value) { - this.featureType = value; - } + public String getFeatureType() + { + return featureType; + } + /** + * Sets the value of the featureType property. + * + * @param value + * allowed object is {@link String } + * + */ + public void setFeatureType(String value) + { + this.featureType = value; } + } + }