X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=test%2Fjalview%2Fdatamodel%2FMappingTest.java;h=b326d90a117ceddb52027acb90cbbc51172e1d59;hb=bdc5ecb2b1d6021d235c633112990cbacd072c4a;hp=cbecad5c7a6d30cd72b8951aca28903c48b7723e;hpb=e6f2452106817f3d57bb7707187e7787d12571d9;p=jalview.git diff --git a/test/jalview/datamodel/MappingTest.java b/test/jalview/datamodel/MappingTest.java index cbecad5..b326d90 100644 --- a/test/jalview/datamodel/MappingTest.java +++ b/test/jalview/datamodel/MappingTest.java @@ -21,6 +21,7 @@ package jalview.datamodel; import static org.testng.AssertJUnit.assertEquals; +import static org.testng.AssertJUnit.assertSame; import jalview.util.MapList; @@ -66,13 +67,27 @@ public class MappingTest MapList fk = new MapList(new int[] { 1, 6, 8, 13 }, new int[] { 4, 7 }, 3, 1); Mapping m = new Mapping(fk); - assertEquals("[ [1, 6] [8, 13] ] To [ [4, 7] ] ", m.toString()); + assertEquals("[ [1, 6] [8, 13] ] 3:1 to [ [4, 7] ] ", m.toString()); /* * with a sequence */ SequenceI seq = new Sequence("Seq1", ""); m = new Mapping(seq, fk); - assertEquals("[ [1, 6] [8, 13] ] To [ [4, 7] ] Seq1", m.toString()); + assertEquals("[ [1, 6] [8, 13] ] 3:1 to [ [4, 7] ] Seq1", m.toString()); + } + + @Test(groups = { "Functional" }) + public void testCopyConstructor() + { + MapList ml = new MapList(new int[] { 1, 6, 8, 13 }, new int[] { 4, 7 }, + 3, 1); + SequenceI seq = new Sequence("seq1", "agtacg"); + Mapping m = new Mapping(seq, ml); + m.setMappedFromId("abc"); + Mapping copy = new Mapping(m); + assertEquals("abc", copy.getMappedFromId()); + assertEquals(ml, copy.getMap()); + assertSame(seq, copy.getTo()); } }