X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=test%2Fjalview%2Fgui%2FPopupMenuTest.java;h=edf320277fc35fe5d30c58cc9ac789862c627604;hb=355b140aeb3c249120a37f5251b537703a0b0938;hp=787171dd099e2746833a67e308b8444e5d5ee712;hpb=3412b273e964fb1a9d22564b04a5f0c827ec2461;p=jalview.git
diff --git a/test/jalview/gui/PopupMenuTest.java b/test/jalview/gui/PopupMenuTest.java
index 787171d..edf3202 100644
--- a/test/jalview/gui/PopupMenuTest.java
+++ b/test/jalview/gui/PopupMenuTest.java
@@ -1,9 +1,37 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.gui;
import static org.testng.AssertJUnit.assertEquals;
import static org.testng.AssertJUnit.assertFalse;
import static org.testng.AssertJUnit.assertTrue;
+import jalview.datamodel.AlignmentAnnotation;
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.Annotation;
+import jalview.datamodel.SequenceI;
+import jalview.io.AppletFormatAdapter;
+import jalview.io.FormatAdapter;
+import jalview.util.MessageManager;
+
import java.awt.Component;
import java.io.IOException;
import java.util.ArrayList;
@@ -17,13 +45,6 @@ import javax.swing.JSeparator;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.Test;
-import jalview.datamodel.AlignmentAnnotation;
-import jalview.datamodel.AlignmentI;
-import jalview.datamodel.Annotation;
-import jalview.datamodel.SequenceI;
-import jalview.io.AppletFormatAdapter;
-import jalview.io.FormatAdapter;
-
public class PopupMenuTest
{
// 4 sequences x 13 positions
@@ -41,7 +62,7 @@ public class PopupMenuTest
PopupMenu testee = null;
- @BeforeMethod
+ @BeforeMethod(alwaysRun = true)
public void setUp() throws IOException
{
alignment = new FormatAdapter().readFile(TEST_DATA,
@@ -52,15 +73,15 @@ public class PopupMenuTest
int i = 0;
for (SequenceI seq : alignment.getSequences())
{
- final AlignmentAnnotation annotation = new AlignmentAnnotation("label" + i,
- "desc" + i, i);
+ final AlignmentAnnotation annotation = new AlignmentAnnotation(
+ "label" + i, "desc" + i, i);
annotation.setCalcId("calcId" + i);
seq.addAlignmentAnnotation(annotation);
annotation.setSequenceRef(seq);
}
}
- @Test
+ @Test(groups = { "Functional" })
public void testConfigureReferenceAnnotationsMenu_noSequenceSelected()
{
JMenuItem menu = new JMenuItem();
@@ -78,7 +99,7 @@ public class PopupMenuTest
* are no reference annotations to add to the alignment. The menu item should
* be disabled.
*/
- @Test
+ @Test(groups = { "Functional" })
public void testConfigureReferenceAnnotationsMenu_noReferenceAnnotations()
{
JMenuItem menu = new JMenuItem();
@@ -99,7 +120,7 @@ public class PopupMenuTest
* reference annotations are already on the alignment. The menu item should be
* disabled.
*/
- @Test
+ @Test(groups = { "Functional" })
public void testConfigureReferenceAnnotationsMenu_alreadyAdded()
{
JMenuItem menu = new JMenuItem();
@@ -119,7 +140,7 @@ public class PopupMenuTest
* The menu item should be enabled, and acquire a tooltip which lists the
* annotation sources (calcIds) and type (labels).
*/
- @Test
+ @Test(groups = { "Functional" })
public void testConfigureReferenceAnnotationsMenu()
{
JMenuItem menu = new JMenuItem();
@@ -130,7 +151,9 @@ public class PopupMenuTest
testee.configureReferenceAnnotationsMenu(menu, seqs);
assertTrue(menu.isEnabled());
- String expected = "
Add annotations for JMOL/secondary structure PBD/Temp |
";
+ String s = MessageManager.getString("label.add_annotations_for");
+ String expected = ""
+ + s + "
Jmol/secondary structure
PDB/Temp
";
assertEquals(expected, menu.getToolTipText());
}
@@ -140,7 +163,7 @@ public class PopupMenuTest
* on the alignment. The menu item should be enabled, and acquire a tooltip
* which lists the annotation sources (calcIds) and type (labels).
*/
- @Test
+ @Test(groups = { "Functional" })
public void testConfigureReferenceAnnotationsMenu_notOnAlignment()
{
JMenuItem menu = new JMenuItem();
@@ -151,7 +174,9 @@ public class PopupMenuTest
testee.configureReferenceAnnotationsMenu(menu, seqs);
assertTrue(menu.isEnabled());
- String expected = "Add annotations for JMOL/secondary structure PBD/Temp |
";
+ String s = MessageManager.getString("label.add_annotations_for");
+ String expected = ""
+ + s + "
Jmol/secondary structure
PDB/Temp
";
assertEquals(expected, menu.getToolTipText());
}
@@ -169,7 +194,7 @@ public class PopupMenuTest
// PDB.secondary structure on Sequence0
AlignmentAnnotation annotation = new AlignmentAnnotation(
"secondary structure", "", 0);
- annotation.setCalcId("PBD");
+ annotation.setCalcId("PDB");
seqs.get(0).getDatasetSequence().addAlignmentAnnotation(annotation);
if (addToSequence)
{
@@ -182,7 +207,7 @@ public class PopupMenuTest
// PDB.Temp on Sequence1
annotation = new AlignmentAnnotation("Temp", "", 0);
- annotation.setCalcId("PBD");
+ annotation.setCalcId("PDB");
seqs.get(1).getDatasetSequence().addAlignmentAnnotation(annotation);
if (addToSequence)
{
@@ -195,7 +220,7 @@ public class PopupMenuTest
// JMOL.secondary structure on Sequence0
annotation = new AlignmentAnnotation("secondary structure", "", 0);
- annotation.setCalcId("JMOL");
+ annotation.setCalcId("Jmol");
seqs.get(0).getDatasetSequence().addAlignmentAnnotation(annotation);
if (addToSequence)
{
@@ -219,7 +244,7 @@ public class PopupMenuTest
* The menu item should be enabled, and acquire a tooltip which lists the
* annotation sources (calcIds) and type (labels).
*/
- @Test
+ @Test(groups = { "Functional" })
public void testConfigureReferenceAnnotationsMenu_twoViews()
{
}
@@ -228,7 +253,7 @@ public class PopupMenuTest
* Test for building menu options including 'show' and 'hide' annotation
* types.
*/
- @Test
+ @Test(groups = { "Functional" })
public void testBuildAnnotationTypesMenus()
{
JMenu showMenu = new JMenu();
@@ -239,32 +264,29 @@ public class PopupMenuTest
// PDB.secondary structure on Sequence0
AlignmentAnnotation annotation = new AlignmentAnnotation(
- "secondary structure", "", new Annotation[]
- {});
+ "secondary structure", "", new Annotation[] {});
annotation.setCalcId("PDB");
annotation.visible = true;
seqs.get(0).addAlignmentAnnotation(annotation);
parentPanel.getAlignment().addAnnotation(annotation);
// JMOL.secondary structure on Sequence0 - hidden
- annotation = new AlignmentAnnotation("secondary structure", "", new Annotation[]
- {});
+ annotation = new AlignmentAnnotation("secondary structure", "",
+ new Annotation[] {});
annotation.setCalcId("JMOL");
annotation.visible = false;
seqs.get(0).addAlignmentAnnotation(annotation);
parentPanel.getAlignment().addAnnotation(annotation);
// Jpred.SSP on Sequence0 - hidden
- annotation = new AlignmentAnnotation("SSP", "", new Annotation[]
- {});
+ annotation = new AlignmentAnnotation("SSP", "", new Annotation[] {});
annotation.setCalcId("JPred");
annotation.visible = false;
seqs.get(0).addAlignmentAnnotation(annotation);
parentPanel.getAlignment().addAnnotation(annotation);
// PDB.Temp on Sequence1
- annotation = new AlignmentAnnotation("Temp", "", new Annotation[]
- {});
+ annotation = new AlignmentAnnotation("Temp", "", new Annotation[] {});
annotation.setCalcId("PDB");
annotation.visible = true;
seqs.get(1).addAlignmentAnnotation(annotation);
@@ -284,8 +306,7 @@ public class PopupMenuTest
assertEquals(4, showOptions.length); // includes 'All' and separator
assertEquals(4, hideOptions.length);
- assertEquals("All",
- ((JMenuItem) showOptions[0]).getText());
+ assertEquals("All", ((JMenuItem) showOptions[0]).getText());
assertTrue(showOptions[1] instanceof JPopupMenu.Separator);
assertEquals(JSeparator.HORIZONTAL,
((JSeparator) showOptions[1]).getOrientation());
@@ -295,8 +316,7 @@ public class PopupMenuTest
assertEquals("SSP", ((JMenuItem) showOptions[3]).getText());
assertEquals("JPred", ((JMenuItem) showOptions[3]).getToolTipText());
- assertEquals("All",
- ((JMenuItem) hideOptions[0]).getText());
+ assertEquals("All", ((JMenuItem) hideOptions[0]).getText());
assertTrue(hideOptions[1] instanceof JPopupMenu.Separator);
assertEquals(JSeparator.HORIZONTAL,
((JSeparator) hideOptions[1]).getOrientation());
@@ -310,7 +330,7 @@ public class PopupMenuTest
/**
* Test for building menu options with only 'hide' annotation types enabled.
*/
- @Test
+ @Test(groups = { "Functional" })
public void testBuildAnnotationTypesMenus_showDisabled()
{
JMenu showMenu = new JMenu();
@@ -321,16 +341,14 @@ public class PopupMenuTest
// PDB.secondary structure on Sequence0
AlignmentAnnotation annotation = new AlignmentAnnotation(
- "secondary structure", "", new Annotation[]
- {});
+ "secondary structure", "", new Annotation[] {});
annotation.setCalcId("PDB");
annotation.visible = true;
seqs.get(0).addAlignmentAnnotation(annotation);
parentPanel.getAlignment().addAnnotation(annotation);
// PDB.Temp on Sequence1
- annotation = new AlignmentAnnotation("Temp", "", new Annotation[]
- {});
+ annotation = new AlignmentAnnotation("Temp", "", new Annotation[] {});
annotation.setCalcId("PDB");
annotation.visible = true;
seqs.get(1).addAlignmentAnnotation(annotation);
@@ -369,7 +387,7 @@ public class PopupMenuTest
/**
* Test for building menu options with only 'show' annotation types enabled.
*/
- @Test
+ @Test(groups = { "Functional" })
public void testBuildAnnotationTypesMenus_hideDisabled()
{
JMenu showMenu = new JMenu();
@@ -380,16 +398,14 @@ public class PopupMenuTest
// PDB.secondary structure on Sequence0
AlignmentAnnotation annotation = new AlignmentAnnotation(
- "secondary structure", "", new Annotation[]
- {});
+ "secondary structure", "", new Annotation[] {});
annotation.setCalcId("PDB");
annotation.visible = false;
seqs.get(0).addAlignmentAnnotation(annotation);
parentPanel.getAlignment().addAnnotation(annotation);
// PDB.Temp on Sequence1
- annotation = new AlignmentAnnotation("Temp", "", new Annotation[]
- {});
+ annotation = new AlignmentAnnotation("Temp", "", new Annotation[] {});
annotation.setCalcId("PDB2");
annotation.visible = false;
seqs.get(1).addAlignmentAnnotation(annotation);