X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=webservices%2Fcompbio%2Fws%2Fserver%2Fresource%2FTcoffeeWS.wsdl;h=183f6e84de55c562ec1a4836d3baa375afa67223;hb=da8c820a7fb2edecb190589f3dc9c362e57a2f24;hp=717b4a091c0d38e7e0b3816719a8865388ac72d8;hpb=212bbd43c19f645cccef34a608dc001fb694833c;p=jabaws.git

diff --git a/webservices/compbio/ws/server/resource/TcoffeeWS.wsdl b/webservices/compbio/ws/server/resource/TcoffeeWS.wsdl
index 717b4a0..183f6e8 100644
--- a/webservices/compbio/ws/server/resource/TcoffeeWS.wsdl
+++ b/webservices/compbio/ws/server/resource/TcoffeeWS.wsdl
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
-<!-- Generated by JAX-WS RI at http://jax-ws.dev.java.net. RI's version is JAX-WS RI 2.2.1-hudson-28-. -->
+<!-- Generated by JAX-WS RI at http://jax-ws.dev.java.net. RI's version is Metro/2.1 (branches/2.1-6728; 2011-02-03T14:14:58+0000) JAXWS-RI/2.2.3 JAXWS/2.2. -->
 <definitions targetNamespace="http://msa.data.compbio/01/01/2010/" name="TcoffeeWS" xmlns="http://schemas.xmlsoap.org/wsdl/" xmlns:wsp="http://www.w3.org/ns/ws-policy" xmlns:tns="http://msa.data.compbio/01/01/2010/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:wsp1_2="http://schemas.xmlsoap.org/ws/2004/09/policy" xmlns:soap="http://schemas.xmlsoap.org/wsdl/soap/" xmlns:wsam="http://www.w3.org/2007/05/addressing/metadata" xmlns:wsu="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-utility-1.0.xsd">
   <types>
     <xsd:schema>
@@ -15,11 +15,11 @@
   <message name="ResultNotAvailableException">
     <part name="fault" element="tns:ResultNotAvailableException"/>
   </message>
-  <message name="presetAlign">
-    <part name="parameters" element="tns:presetAlign"/>
+  <message name="align">
+    <part name="parameters" element="tns:align"/>
   </message>
-  <message name="presetAlignResponse">
-    <part name="parameters" element="tns:presetAlignResponse"/>
+  <message name="alignResponse">
+    <part name="parameters" element="tns:alignResponse"/>
   </message>
   <message name="UnsupportedRuntimeException">
     <part name="fault" element="tns:UnsupportedRuntimeException"/>
@@ -30,26 +30,20 @@
   <message name="JobSubmissionException">
     <part name="fault" element="tns:JobSubmissionException"/>
   </message>
-  <message name="WrongParameterException">
-    <part name="fault" element="tns:WrongParameterException"/>
-  </message>
   <message name="customAlign">
     <part name="parameters" element="tns:customAlign"/>
   </message>
   <message name="customAlignResponse">
     <part name="parameters" element="tns:customAlignResponse"/>
   </message>
-  <message name="align">
-    <part name="parameters" element="tns:align"/>
-  </message>
-  <message name="alignResponse">
-    <part name="parameters" element="tns:alignResponse"/>
+  <message name="WrongParameterException">
+    <part name="fault" element="tns:WrongParameterException"/>
   </message>
-  <message name="pullExecStatistics">
-    <part name="parameters" element="tns:pullExecStatistics"/>
+  <message name="presetAlign">
+    <part name="parameters" element="tns:presetAlign"/>
   </message>
-  <message name="pullExecStatisticsResponse">
-    <part name="parameters" element="tns:pullExecStatisticsResponse"/>
+  <message name="presetAlignResponse">
+    <part name="parameters" element="tns:presetAlignResponse"/>
   </message>
   <message name="cancelJob">
     <part name="parameters" element="tns:cancelJob"/>
@@ -57,18 +51,18 @@
   <message name="cancelJobResponse">
     <part name="parameters" element="tns:cancelJobResponse"/>
   </message>
+  <message name="pullExecStatistics">
+    <part name="parameters" element="tns:pullExecStatistics"/>
+  </message>
+  <message name="pullExecStatisticsResponse">
+    <part name="parameters" element="tns:pullExecStatisticsResponse"/>
+  </message>
   <message name="getJobStatus">
     <part name="parameters" element="tns:getJobStatus"/>
   </message>
   <message name="getJobStatusResponse">
     <part name="parameters" element="tns:getJobStatusResponse"/>
   </message>
-  <message name="getPresets">
-    <part name="parameters" element="tns:getPresets"/>
-  </message>
-  <message name="getPresetsResponse">
-    <part name="parameters" element="tns:getPresetsResponse"/>
-  </message>
   <message name="getLimit">
     <part name="parameters" element="tns:getLimit"/>
   </message>
@@ -81,6 +75,12 @@
   <message name="getLimitsResponse">
     <part name="parameters" element="tns:getLimitsResponse"/>
   </message>
+  <message name="getPresets">
+    <part name="parameters" element="tns:getPresets"/>
+  </message>
+  <message name="getPresetsResponse">
+    <part name="parameters" element="tns:getPresetsResponse"/>
+  </message>
   <message name="getRunnerOptions">
     <part name="parameters" element="tns:getRunnerOptions"/>
   </message>
@@ -93,13 +93,12 @@
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultResponse" message="tns:getResultResponse"/>
       <fault message="tns:ResultNotAvailableException" name="ResultNotAvailableException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResult/Fault/ResultNotAvailableException"/>
     </operation>
-    <operation name="presetAlign">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignRequest" message="tns:presetAlign"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignResponse" message="tns:presetAlignResponse"/>
-      <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/UnsupportedRuntimeException"/>
-      <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/LimitExceededException"/>
-      <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/JobSubmissionException"/>
-      <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/WrongParameterException"/>
+    <operation name="align">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignRequest" message="tns:align"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignResponse" message="tns:alignResponse"/>
+      <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/UnsupportedRuntimeException"/>
+      <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/LimitExceededException"/>
+      <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/JobSubmissionException"/>
     </operation>
     <operation name="customAlign">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlignRequest" message="tns:customAlign"/>
@@ -109,29 +108,26 @@
       <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/JobSubmissionException"/>
       <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/WrongParameterException"/>
     </operation>
-    <operation name="align">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignRequest" message="tns:align"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignResponse" message="tns:alignResponse"/>
-      <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/UnsupportedRuntimeException"/>
-      <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/LimitExceededException"/>
-      <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/JobSubmissionException"/>
-    </operation>
-    <operation name="pullExecStatistics">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsRequest" message="tns:pullExecStatistics"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsResponse" message="tns:pullExecStatisticsResponse"/>
+    <operation name="presetAlign">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignRequest" message="tns:presetAlign"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignResponse" message="tns:presetAlignResponse"/>
+      <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/UnsupportedRuntimeException"/>
+      <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/LimitExceededException"/>
+      <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/JobSubmissionException"/>
+      <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/WrongParameterException"/>
     </operation>
     <operation name="cancelJob">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobRequest" message="tns:cancelJob"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobResponse" message="tns:cancelJobResponse"/>
     </operation>
+    <operation name="pullExecStatistics">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsRequest" message="tns:pullExecStatistics"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsResponse" message="tns:pullExecStatisticsResponse"/>
+    </operation>
     <operation name="getJobStatus">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusRequest" message="tns:getJobStatus"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusResponse" message="tns:getJobStatusResponse"/>
     </operation>
-    <operation name="getPresets">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsRequest" message="tns:getPresets"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsResponse" message="tns:getPresetsResponse"/>
-    </operation>
     <operation name="getLimit">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitRequest" message="tns:getLimit"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitResponse" message="tns:getLimitResponse"/>
@@ -140,6 +136,10 @@
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsRequest" message="tns:getLimits"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsResponse" message="tns:getLimitsResponse"/>
     </operation>
+    <operation name="getPresets">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsRequest" message="tns:getPresets"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsResponse" message="tns:getPresetsResponse"/>
+    </operation>
     <operation name="getRunnerOptions">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsRequest" message="tns:getRunnerOptions"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsResponse" message="tns:getRunnerOptionsResponse"/>
@@ -159,7 +159,7 @@
         <soap:fault name="ResultNotAvailableException" use="literal"/>
       </fault>
     </operation>
-    <operation name="presetAlign">
+    <operation name="align">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -176,9 +176,6 @@
       <fault name="JobSubmissionException">
         <soap:fault name="JobSubmissionException" use="literal"/>
       </fault>
-      <fault name="WrongParameterException">
-        <soap:fault name="WrongParameterException" use="literal"/>
-      </fault>
     </operation>
     <operation name="customAlign">
       <soap:operation soapAction=""/>
@@ -201,7 +198,7 @@
         <soap:fault name="WrongParameterException" use="literal"/>
       </fault>
     </operation>
-    <operation name="align">
+    <operation name="presetAlign">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -218,8 +215,11 @@
       <fault name="JobSubmissionException">
         <soap:fault name="JobSubmissionException" use="literal"/>
       </fault>
+      <fault name="WrongParameterException">
+        <soap:fault name="WrongParameterException" use="literal"/>
+      </fault>
     </operation>
-    <operation name="pullExecStatistics">
+    <operation name="cancelJob">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -228,7 +228,7 @@
         <soap:body use="literal"/>
       </output>
     </operation>
-    <operation name="cancelJob">
+    <operation name="pullExecStatistics">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -246,7 +246,7 @@
         <soap:body use="literal"/>
       </output>
     </operation>
-    <operation name="getPresets">
+    <operation name="getLimit">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -255,7 +255,7 @@
         <soap:body use="literal"/>
       </output>
     </operation>
-    <operation name="getLimit">
+    <operation name="getLimits">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -264,7 +264,7 @@
         <soap:body use="literal"/>
       </output>
     </operation>
-    <operation name="getLimits">
+    <operation name="getPresets">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>