X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=conf%2Fsettings%2FMafftLimits.xml;h=b3b3f81f6487c5b884e9f4eba78219e11870e4bb;hb=55c98899ff648c53c8d53fe308c4b26f8d6f9468;hp=06a6324764d818eb903347c25169aad8d8ba2e30;hpb=535359a3d592ee41bda72e7356f0181f6cee9d07;p=jabaws.git

diff --git a/conf/settings/MafftLimits.xml b/conf/settings/MafftLimits.xml
index 06a6324..b3b3f81 100644
--- a/conf/settings/MafftLimits.xml
+++ b/conf/settings/MafftLimits.xml
@@ -7,7 +7,41 @@
 	</limit>
 	<limit isDefault="false">
 		<preset># LocalEngineExecutionLimit #</preset>
+		<seqNumber>20</seqNumber>
+		<seqLength>500</seqLength>
+	</limit>
+	
+	<!-- Limits for presets	--> 
+
+	<limit isDefault="false">
+		<preset>L-INS-i (Accuracy-oriented)</preset>
+		<seqNumber>500</seqNumber>
+		<seqLength>1000</seqLength>
+	</limit>
+	<limit isDefault="false">
+		<preset>G-INS-i (Accuracy-oriented)</preset>
+		<seqNumber>500</seqNumber>
+		<seqLength>1000</seqLength>
+	</limit>
+	<limit isDefault="false">
+		<preset>E-INS-i (Accuracy-oriented)</preset>
 		<seqNumber>500</seqNumber>
 		<seqLength>1000</seqLength>
 	</limit>
+	<limit isDefault="false">
+		<preset>FFT-NS-i (Speed oriented)</preset>
+		<seqNumber>2000</seqNumber>
+		<seqLength>1000</seqLength>
+	</limit>
+	<limit isDefault="false">
+		<preset>FFT-NS-1 (Speed oriented)</preset>
+		<seqNumber>2000</seqNumber>
+		<seqLength>1000</seqLength>
+	</limit>
+	<limit isDefault="false">
+		<preset>NW-NS-PartTree-1 (Speed oriented)</preset>
+		<seqNumber>2000</seqNumber>
+		<seqLength>1000</seqLength>
+	</limit>
+	
 </limits>