X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=examples%2Ftest_fab41.result%2Fsample.a3m;h=1e3e2cd40122aad8a84d8939dd767ca9088d80f3;hb=730325fdf22404c6f251adae0da5ec6386c3962e;hp=6408d6ffdd8095a402e73e5ae35c6b731c6fd6fa;hpb=5d01a31888d046245981a4171850acd63a1f2862;p=jalview.git

diff --git a/examples/test_fab41.result/sample.a3m b/examples/test_fab41.result/sample.a3m
index 6408d6f..1e3e2cd 100644
--- a/examples/test_fab41.result/sample.a3m
+++ b/examples/test_fab41.result/sample.a3m
@@ -1,50 +1,32 @@
->101/1-59
+>101
 PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGGELASK
->A0A7C4BER2	87	0.406	6.001E-18	0	58	59	1	59	65/1-59
-PVVTIEMWEGRTPEQKKALVEAVTSAVAGAIGCPPEAVEVIIHEVPKVNWGIGGQIASE
->A0A1M5AEK1	85	0.338	2.938E-17	0	58	59	1	59	68/1-59
-PIYHIEMMEGRTPEQKRKLVEAVTRVSVDILGGSPEAVHVLIHEIPRDNWATGGQLWSE
->A0A429EDM9	84	0.355	7.621E-17	0	58	59	1	59	61/1-59
-PMINVSMFPGRTAEQKQALVREVTDAFVRTCGGNPEGVWVTINEIPAEHWASGGTLFSE
->A0A7C3TX99	84	0.372	7.621E-17	0	58	59	1	59	62/1-59
-PVVTVEMWEGRTDEQKRKLAELVTNAVCEAIGCPREAVEVIMREVPRKNWAIGGKLASE
->A0A4P6L4R2	83	0.322	1.977E-16	0	58	59	1	59	61/1-59
-PTINVQLFEGRTPEQKRAFVQAVTQATVETLGSSPESVDIILHEVKREHWATGGKLWSE
->UPI0003671E29	83	0.362	1.977E-16	0	57	59	1	58	61/1-58
-PLINVTMFPGRTEEQKRELVRELTDAFARTCDANPDGVWVTINEVPPERWAVGGRLIS-
->A0A847M6U1	83	0.379	1.977E-16	0	57	59	1	58	63/1-58
-PFVTVKMWEGRTTEQKAAIIEKVTEALIESMGVEPEHVSVVLQEYPKENWGVGGQLAS-
->A0A7C3BUL5	82	0.322	2.716E-16	0	58	59	1	59	60/1-59
-PLVTVEMWEGRTVEQKKELAQGITSVMTDKLGIPPEAVTIIIKDVPKHNWAIGGKLSSE
->A0A1F9XKG5	82	0.372	3.733E-16	0	58	59	1	59	65/1-59
-PVIKIEMWKGRTHEQKKKLVEKVTSATVESIGCPPEAVQIIINEVDKENWGLAGQLASE
->A0A0F0E1Y4	81	0.338	5.129E-16	0	58	59	1	59	61/1-59
-PILRLEMHPGRTPEQKRDFVREVTQVAVEVLKCPPESVDVVIYEVPREQWAKAGKLVSE
->UPI0011096F0C	81	0.355	5.129E-16	0	58	59	1	59	63/1-59
-PTYHVEMFEGRSPEQKKQLVEEVTRVTAETLGCSPEAVDIIITEVKRENWSTGGKLWSE
->A0A4Q3J2V2	81	0.389	5.129E-16	0	58	59	1	59	64/1-59
-PTIHVQMFEGRSAEQKRDFVREVTEAACRTLGCKPDSVDIIIQDVSRANWASGGKLWSE
->UPI00168717C6	81	0.310	5.129E-16	0	57	59	1	58	64/1-58
-PFVVVHMWDGRSVEQKRELAKAITDAMVEHAGARPDALHVAIQEYPKENWARAGVLGS-
->UPI00197BDC4A	81	0.392	7.048E-16	2	57	59	1	56	66/1-56
---IHVEMYPGRTPEQKADLVREVTDAFVRTCGGNPDGVWVVIQEVPGEHWGVGGQLAS-
->UPI00069C494D	81	0.305	7.048E-16	0	58	59	1	59	83/1-59
-PVVIIEMYPGRTPEQKRALVKAVTEAMVEHAGARPDHLHVILHEVAPENWALAGRLGTE
->A0A8J3FTW4	81	0.338	9.684E-16	0	58	59	1	59	64/1-58
-PLIRVSMFPGRTEEQKRELVAETEAFLRTCGGKREGVWVVIDEVPREHWAVGGRLSSE
->UPI00124B17A4	80	0.327	1.829E-15	0	57	59	1	58	61/1-57
-PTINVQMFAGRSAEQKRAFVKATDATCESLGCKPEGVDVIIQEVKREDWATGGKLWS-
->A0A662P0H6	80	0.440	1.829E-15	0	58	59	1	59	61/1-58
-PIVEIKMWAGRTEEQKERLVKETEAVTRALGVEPEETQVIIIEIPKSNWGVSGRLASK
->UPI0015FCCAFB	80	0.310	1.829E-15	0	57	59	1	58	61/1-57
-PHITVQHLAGRSTEQKRELARETDAYVRVTGIKPESVWVTFQDVPAEDWAVGGTPIA-
->A0A2S1XR35	80	0.293	1.829E-15	0	57	59	1	58	62/1-57
-PLINVQLFEGRTPEQKRAYAKATDASVEVLGCSPEAVDVIFHDVKKSDWASGGKLWS-
->A0A327JYV8	80	0.288	1.829E-15	0	58	59	1	59	63/1-58
-PVVTVEMWTGRSREQKRALVRATDAMVTHAGAKPDNLHVIIHEVPKEDWALAGVMGDE
->A0A7V8JTY1	79	0.379	2.513E-15	0	57	59	1	58	60/1-57
-PTFNIQLFEGRSLEQRRELVKATEVTCKTLQCPPESVDIIIQEVKKENWATGGKLWS-
->A0A7C6ZGD0	79	0.327	2.513E-15	0	57	59	1	58	61/1-57
-PIVRVEMWEGRTVEQKRELAKATEDMVKIAGAKPEAVVVIFEDVPKHNWATGGVLWS-
->UPI0005AB22ED	79	0.362	2.513E-15	0	57	59	1	58	61/1-57
-PLIQVKQLAGRSEEQKRAIARETDAFVRATGVRPEAVWVTIDELPPENWAIGGTLVA-
+>UPI000695F0FD	38	0.235	1.216E+00	0	57	59	69	136	151
+PHyeVSVTMPTGWlNTVRKQGMIDAVTRALLEAIATPFDEssrfrVRCLIPEIPDGNWGSGGyaLPLS-
+>SRR5512138_1377460	56	0.275	5.500E-07	0	58	59	66	134	140
+PHVAVKLYPGRTEQQKEQLARAIADDVMRILGSSEASVSVSIEEVDAADWAEkvyrplivegGGTLYKK
+>SRR5579871_5171350	56	0.260	5.500E-07	0	58	59	99	167	172
+PHVIVKLWPGRSEPQKQKLVESVTKAVTTSLGYSDEAVSVSLQEVPSDQWtekvyrpdilGTAGRLYKK
+>MGYP000923236236	52	0.227	1.338E-05	0	58	59	1	79	191
+PIVRITMFEGRTKEQKQELARVITEAVVNIAKTTPDATEVkdqILQKVllvrslrlPPppasrrqvsGAWSADGKPTSE
+>4468|scaffold_1473490_c1_1|-89|00	51	0.202	2.534E-05	0	58	59	41	109	115
+PHVIVKLWPGKSEREETQLAEAITKSVTETLNFGPESVSVAFEEIPAKDWAskvyhadiIGneGKLYKK
+>SRR6185503_13177952	48	0.250	4.494E-04	0	58	59	12	79	182
+PLVRITYPRGaLSPEHKTRIARALTEIVLDVevdaaTDAGRMVTVVHFNEAAPDDWAVGGEirsTAAE
+>SRR6185436_16110281	46	0.235	2.223E-03	0	58	59	68	135	197
+PLVRITYPRGaLSPDHKRRIARELTEIVLDVevdaaTDAGRMVTVIHFNEAAADDWAVGGEirsTAAE
+>SRR5258706_5983935	45	0.250	4.216E-03	0	58	59	65	132	177
+PRYRVipTVPEGQySNESRKALVKDVTEAVVRADGGKYEDvaprVWVFPTEIPDGQWGSRGviRPLPE
+>SRR5258708_19012803	45	0.264	4.216E-03	0	58	59	253	320	363
+PRYRIipTVPEGQySNESRKALVKDVTEAVVRADGGKYEDvaprVWVFPTEIPDGQWGSRGviRPLPE
+>SRR5207247_4366399	39	0.231	5.146E-01	0	58	59	36	104	105
+PVIEMFVPEGLaDAEAKRALHDRVSRQVLEVEGAtydesPLAQsiTWMLIQEVLECGWSVGSKAvwASE
+>SRR5215212_2981939	39	0.308	5.146E-01	0	58	59	23	90	161
+PIIEMHVQEGvLDEETKRTLHERVGRQVLEIEGAnyDENDVarlltFMFIREHPEGGFSIGGEMItSE
+>SRR3954452_24621378	38	0.197	7.091E-01	0	55	59	12	82	121
+PLyrVDVTVPEGsmihgQGPwalSRRRAIVREVTEIVLEAEGSDPSlgeawRVWVVLREVGDAFWGAAGEL---
+>SRR5438045_3761950	38	0.271	1.347E+00	0	54	59	17	86	122
+PLyrVQITVPEGsmlhgQGPwaiERRRELVRAVSKAVLDAEGTeynPASawRVWVLMSEISETHWGAAGE----
+>SRR5258707_1096459	37	0.222	2.559E+00	0	57	59	54	125	137
+PLVEMSFPVGvLTLDQKAAMIKSVTDVVRGAMKLPPDparKLFVEIFETPGGGFGVtakvvvvpGGkyRPAP-
+>SRR5438270_3928578	36	0.141	3.528E+00	0	54	59	15	99	112
+PLVEIDLLEAWAPDQIDAIADAIHEAMVETLGVPEraagrdsatkqhfysrfaallaeratvqsADLTAVLVENSRDDWSFGmGQ----