X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Farchaeopteryx%2FMainFrame.java;h=ac08d253a4a02ab0467d92e07e84153ad48b3f3f;hb=65a8c5b4114a280f1ec4977c89e2f5373fd68104;hp=26600d9e536e89c64ef96390fb04d3ec4346be6e;hpb=8e37534c03f75befdad0d75fbf8e05be11cde71a;p=jalview.git

diff --git a/forester/java/src/org/forester/archaeopteryx/MainFrame.java b/forester/java/src/org/forester/archaeopteryx/MainFrame.java
index 26600d9..ac08d25 100644
--- a/forester/java/src/org/forester/archaeopteryx/MainFrame.java
+++ b/forester/java/src/org/forester/archaeopteryx/MainFrame.java
@@ -48,6 +48,7 @@ import javax.swing.SwingUtilities;
 import org.forester.archaeopteryx.Options.CLADOGRAM_TYPE;
 import org.forester.archaeopteryx.Options.NODE_LABEL_DIRECTION;
 import org.forester.archaeopteryx.Options.PHYLOGENY_GRAPHICS_TYPE;
+import org.forester.archaeopteryx.tools.InferenceManager;
 import org.forester.archaeopteryx.tools.ProcessPool;
 import org.forester.archaeopteryx.tools.ProcessRunning;
 import org.forester.phylogeny.Phylogeny;
@@ -215,6 +216,7 @@ public abstract class MainFrame extends JFrame implements ActionListener {
     Configuration             _configuration;
     JMenuItem                 _remove_branch_color_item;
     Options                   _options;
+    InferenceManager          _inference_manager;
     final ProcessPool         _process_pool;
 
     MainFrame() {
@@ -901,6 +903,14 @@ public abstract class MainFrame extends JFrame implements ActionListener {
         _options = options;
     }
 
+    void setInferenceManager( final InferenceManager i ) {
+        _inference_manager = i;
+    }
+
+    public InferenceManager getInferenceManager() {
+        return _inference_manager;
+    }
+
     void setSelectedTypeInTypeMenu( final PHYLOGENY_GRAPHICS_TYPE type ) {
         setTypeMenuToAllUnselected();
         switch ( type ) {