X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fpccx%2FExternalNodeBasedCoverageMethodOptions.java;h=5e572187226e4652c71ec8c1c26f1d7f7f0c7a71;hb=50c2ff100214fbb04b5f9665466e6d98d26b051d;hp=c88c35ed30b1c2307a14d9122b6ce9c87861a904;hpb=48f7a89be9d34f1930a1f863e608235cc27184c5;p=jalview.git diff --git a/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethodOptions.java b/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethodOptions.java index c88c35e..5e57218 100644 --- a/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethodOptions.java +++ b/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethodOptions.java @@ -6,7 +6,7 @@ // Copyright (C) 2008-2009 Christian M. Zmasek // Copyright (C) 2008-2009 Burnham Institute for Medical Research // All rights reserved -// +// // This library is free software; you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public // License as published by the Free Software Foundation; either @@ -16,13 +16,13 @@ // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU // Lesser General Public License for more details. -// +// // You should have received a copy of the GNU Lesser General Public // License along with this library; if not, write to the Free Software // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA // // Contact: phylosoft @ gmail . com -// WWW: www.phylosoft.org/forester +// WWW: https://sites.google.com/site/cmzmasek/home/software/forester package org.forester.pccx; @@ -33,7 +33,7 @@ public class ExternalNodeBasedCoverageMethodOptions implements CoverageCalculati /** * This constructor sets the class name for the scoring method e.g. * "org.forester.tools.modeling.BranchCountingBasedScoringMethod" - * + * * @param scoring_method * class name for the scoring method */ @@ -41,6 +41,7 @@ public class ExternalNodeBasedCoverageMethodOptions implements CoverageCalculati _scoring_method = scoring_method; } + @Override public String asString() { final StringBuffer sb = new StringBuffer(); sb.append( "scoring method: " );