X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=forester%2Fruby%2Fevoruby%2Flib%2Fevo%2Ftool%2Ftaxonomy_processor.rb;h=1d8a25bde4b888983bb16adfae67dcba21ae141d;hb=971d9105afd46581e56d4c0221500f47b3979496;hp=6a4bb5fbcf774cff9da14a1ee09f5d97dfdc9b53;hpb=a2be52673716ddf6f158c0831075d47635779e64;p=jalview.git diff --git a/forester/ruby/evoruby/lib/evo/tool/taxonomy_processor.rb b/forester/ruby/evoruby/lib/evo/tool/taxonomy_processor.rb index 6a4bb5f..1d8a25b 100644 --- a/forester/ruby/evoruby/lib/evo/tool/taxonomy_processor.rb +++ b/forester/ruby/evoruby/lib/evo/tool/taxonomy_processor.rb @@ -19,7 +19,7 @@ module Evoruby class TaxonomyProcessor PRG_NAME = "tap" - PRG_DATE = "170213" + PRG_DATE = "170214" PRG_DESC = "Replacement of labels in multiple sequence files" PRG_VERSION = "2.004" WWW = "https://sites.google.com/site/cmzmasek/home/software/forester" @@ -208,6 +208,8 @@ module Evoruby puts( " options: -" + EXTRACT_TAXONOMY_OPTION + " : to extract taxonomy information from bracketed expressions" ) puts( " -" + ANNOTATION_OPTION + "=: to add an annotation to all entries" ) puts() + puts( " [next steps in standard analysis pipeline: hmmscan followed by hsp.rb]") + puts() puts( "Example:" ) puts() puts( " " + PRG_NAME + ".rb P53.fasta" )