X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=help%2Fhtml%2FcolourSchemes%2Fuser.html;h=fb6c3565db93b0ed08a5734b0ef2b08bfd1b4a03;hb=a58c1f3005f962f3d48043e38fd5e621081eb9b0;hp=2fc26e3d502fa66614dbb7686d93543dfd85a3c5;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git diff --git a/help/html/colourSchemes/user.html b/help/html/colourSchemes/user.html index 2fc26e3..fb6c356 100755 --- a/help/html/colourSchemes/user.html +++ b/help/html/colourSchemes/user.html @@ -1,39 +1,66 @@ -
User Defined Colours
--
You may define any number of new colour schemes, each with a unique name.
-
- Each of the residues in a new colour scheme may be assigned a new user defined
- colour.
+
+ User Defined Colours +
++ +
+
+ You may define any number of new colour schemes, each with a unique
+ name.
Each of the residues in a colour scheme
+ may be assigned any chosen colour.
Select one or more
+ residues, then select the desired colour.
Use Ctrl-click to
+ select multiple residues, or click then Shift-click to select a
+ block.
Note that the currently selected buttons are
+ highlighted by a lighter text colour.
+
+ The Case Sensitive option allows you to choose + distinct colours for upper and lower case residue codes. +
+ The Lower Case Colour option allows you to apply a selected colour + to all lower case residues. +
+ Click Apply or OK to set your new
+ colours on the active alignment window.
Click Cancel
+ to undo your changes if you pressed the Apply
+ button.
+
Click "Cancel" to undo your changes if you pressed the "Apply"
- button.
+
Any saved colour schemes will be automatically loaded the
+ next time you use Jalview.
- If you save your colour scheme with a unique name the colour scheme name will
- be added to the "Colour" menu on each new alignment window.
- Any saved colour schemes will be automatically loaded the next time you use
- Jalview.