X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=help%2Fhtml%2Ffeatures%2Fannotation.html;h=a036bd52b0c1f8a9a836978aea0fbdce00436568;hb=2fec1f5de1ec639826d84b7e20c19b37c2a98d55;hp=01353aa478d3fe77441008b9219ccf8894ffd1fc;hpb=797df64fa2a0a30773d0f48f5494d4155e5a8be3;p=jalview.git
diff --git a/help/html/features/annotation.html b/help/html/features/annotation.html
index 01353aa..a036bd5 100755
--- a/help/html/features/annotation.html
+++ b/help/html/features/annotation.html
@@ -1,21 +1,24 @@
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see
Alignment Annotation
@@ -27,11 +30,24 @@ Annotation is not ticked). Any displayed annotation row can be hidden (using the pop-up menu obtained by right-clicking the label), or re-ordered by dragging the label to a new position with the left mouse button. -Web services can also add annotation to an alignment (see the - JNet web service), and as of Jalview 2.08 quantitative and symbolic - annotations can be added to an alignment via an Annotations - File dragged into the alignment window or loaded from the - alignment's file menu.
++Web services can also add annotation to an alignment (see the JNet and Disorder protein +structure prediction services), and as of Jalview 2.08 quantitative +and symbolic annotations can be added to an alignment via an Annotations File dragged into the +alignment window or loaded from the alignment's file menu. +
+Sequence Reference Annotation +
++ Sequence reference annotation is created from 3D structure + data, and from the results of sequence based prediction of + secondary structure and disordered region + prediction methods. +
Interactive Alignment Annotation
Annotation rows are added using the Annotation Label @@ -39,16 +55,23 @@ menu, which is obtained by clicking anywhere on the annotation row labels area (below the sequence ID area).