X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=help%2Fhtml%2Fmenus%2FdesktopMenu.html;h=d716e33c10673ed09d8f39b2ad39270ce4694a0d;hb=eb190489441b102c7dce1ee0121df7efd3e74b1a;hp=153a79a211e1e995e300e399faf26b0f96b19561;hpb=e5cbd35e13f46ae1d59a08b0af1086677418141d;p=jalview.git
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+
+
+ Vamsas For more details, read the
+ Jalview VAMSAS documentation.
+ When no session is active, the menu provides options for
+ initiating a new VAMSAS session:
+
+
+ - Connect to
Connect to
+ one of the existing sessions available.
+ - New VAMSAS session
Initiates
+ a new local VAMSAS session.
+ - Load VAMSAS session...
Opens
+ a file browser allowing you to choose a VAMSAS document to
+ import into a new local session.
+
When Jalview is joined to a VAMSAS session, the menu
+ contains the following:
+
+ - Session Update
Sends
+ alignment data in the Jalview desktop to the VAMSAS session.
+ - Save VAMSAS Session...
Saves
+ the current session to a VAMSAS document archive.
+ - Stop VAMSAS Session
Disconnects
+ from the current session. You may be asked if you want to
+ save the current session's data if no other VAMSAS clients
+ are connected.
+
+ Help
+
+ - About
+ Displays the version and creation date of the
+ application, as well as acknowledgements and a citation
+ reference.
+ - Documentation
+ Displays help files as a browseable, searchable set of
+ pages with a table of contents.
+
+ Window
Each time a new
+ window is added to the Jalview Desktop a corresponding menu item
+ will be added to the "Window" menu that will bring the
+ window to the top of the pile when it is selected.
+
+ - Close All
Close all
+ alignment and analysis windows.
Note:
+ This will erase all alignments from memory, and cannot be
+ undone!
+ - Raise Associated Windows
+ Bring all windows associated with the current alignment to
+ the top of the pile.
+ - Minimise Associated Windows
+ Hide all windows related to the current alignment behind
+ icons on the Jalview Desktop.
+
+
+