X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=help%2Fhtml%2Freleases.html;h=30aa7f2ffeb89a133d38777e22cc860d9b99ffd0;hb=f3210a53ff0c7fcb833319ce6dfd322ac8d2ee23;hp=2d0c4e8cfb89645dd44bdc96466372250be47bce;hpb=4550191c87ce9e044ce35980d4c926684fe4f04a;p=jalview.git
diff --git a/help/html/releases.html b/help/html/releases.html
index 2d0c4e8..30aa7f2 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -55,7 +55,9 @@
General
- Improved memory usage: sparse arrays used for all consensus calculations
-
+ - Updated Jmol shipped with applet and desktop to 14.6.4
+
+
Application
@@ -63,7 +65,8 @@
- New replacement token for creating URLs just from database cross references. Users with custom links will receive a warning dialog asking them to update their preferences.
- Cancel button and escape listener on dialog warning user about disconnecting Jalview from a Chimera session
- Custom URL links for database cross-references are matched to database name regardless of case
-
+ - Select highlighted columns menu item and keystroke (B) to mark columns containing highlighted regions from structure selections or results of a Find operation
+ - Command line option for batch-generation of HTML pages rendering alignment data with the BioJS MSAviewer
@@ -84,16 +87,28 @@
Threonine incorrectly reported as not hydrophobic
Updates to documentation pages (above PID threshold, amino acid properties)
Lower case residues in sequences are not reported as mapped to residues in a structure file in the View Mapping report
+ Identical features with non-numeric scores could be added multiple times to a sequence
+
Application
- - Custom URL links for specific database names without regular expressions also offer invalid links from Sequence ID
+ - Custom URL links for specific database names without regular expressions also offer links from Sequence ID
- Removing a single configured link in the URL links pane in Connections preferences doesn't actually update Jalview configuration
- CTRL-Click on a selected region to open the alignment area popup menu doesn't work on El-Capitan
- Jalview doesn't offer to associate mmCIF files with similarly named sequences if dropped onto the alignment
- Additional mappings are shown for PDB entries where more chains exist in the PDB accession than are reported in the SIFTS file
- Certain structures do not get mapped to the structure view when displayed with Chimera
- No chains shown in the Chimera view panel's View->Show Chains submenu
+ - Export as HTML with embedded SVG doesn't work for wrapped alignment views
+ -
+ Disulphide bond features shown as two
+ highlighted residues rather than a range in linked
+ structure views, and treated correctly when selecting and
+ computing trees from features
+
+ - Rename UI components for running JPred predictions from 'JNet' to 'JPred'
+
+