X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=help%2Fhtml%2Freleases.html;h=65fbabb36f2f3a571b4ce466cd51c28d5635c4bf;hb=e71ef8c833f4ebea12df2ecacf3e28d8ada895d7;hp=0ca65c03d513072ad69410d8eb3ffb4a71ee85a5;hpb=fb6e6ecaf1aa86750f84e833ff83471d3cbd526c;p=jalview.git
diff --git a/help/html/releases.html b/help/html/releases.html
index 0ca65c0..65fbabb 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -68,6 +68,72 @@ li:before {
+
+
+ |
+
+
+
+ -
+ Change in recommended way of starting
+ Jalview via a Java command line: add jars in lib directory
+ to CLASSPATH, rather than via the deprecated java.ext.dirs
+ property.
+
+
+ |
+
+
+
+ -
+ Hidden sequence markers and representative
+ sequence bolding included when exporting alignment as EPS,
+ SVG, PNG or HTML. Display of these can be
+ configured via the Format menu or in batch mode with a
+ jalview properties file.
+
+ -
+ Corrupted display when switching to
+ wrapped mode when sequence panel's vertical scrollbar is
+ visible.
+
+ -
+ Alignment is black in exported EPS file
+ when sequences are selected in exported view.
+
+ -
+ Groups with different coloured borders
+ aren't rendered with correct colour.
+
+ -
+ Jalview could hang when importing certain
+ types of knotted RNA secondary structure
+
+ -
+ Sequence highlight and selection in
+ trimmed VARNA 2D structure is incorrect for sequences that
+ do not start at 1
+
+ -
+ '.' inserted into RNA secondary structure
+ annotation when columns are inserted into an alignment
+
+ -
+ '.' written into RNA secondary structure
+ annotation when writing out Stockholm format
+
+ -
+ Jalview annotation rows containing upper
+ and lower-case 'E' and 'H' do not automatically get
+ treated as RNA secondary structure
+
+
+
+ |
+
+
2.10.4b1
@@ -78,13 +144,13 @@ li:before {
-
- Windows File Shortcuts can be dragged
- onto the Jalview Desktop
-
- -
Use HGVS nomenclature for variant
annotation retrieved from Uniprot
+ -
+ Windows File Shortcuts can be dragged
+ onto the Jalview Desktop
+
|
@@ -92,7 +158,7 @@ li:before {
-
Cannot import features with multiple
- variant elements
+ variant elements (blocks import of some Uniprot records)
-
Clustal files with sequence positions in
@@ -103,12 +169,16 @@ li:before {
not alignment area in exported graphic
-
+ F2/Keyboard mode edits work when Overview
+ window has input focus
+
+ -
Annotation panel set too high when
- annotation added to view
+ annotation added to view (Windows)
-
- F2/Keyboard mode edits work when Overview
- window has input focus
+ Jalview Desktop is slow to start up when
+ network connectivity is poor
-
Drag URL from chrome, firefox, IE to
|