X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=help%2Fhtml%2Freleases.html;h=d4bbd337d860f838cc1212a3d79761f2c465ddd8;hb=6790716940a46f86f5670294c674eadf8ca6bccf;hp=afa11d9ef3919c716e3431a9c4d79d0b1928eb4b;hpb=85ac8be08a966098ea515abeff242c18dbac3b9e;p=jalview.git
diff --git a/help/html/releases.html b/help/html/releases.html
index afa11d9..d4bbd33 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -45,6 +45,130 @@
+
+
+ |
+ General
+ Application
+ Applet
+ |
+
+
+ General
+
+ Application
+
+ Applet
+
+
+ |
+
+
+
+
+ |
+ General
+
+ - Time stamps for signed Jalview application and applet
+ jars
+ |
+
+
+ Application
+
+ - Duplicate group consensus and conservation rows
+ shown when tree is partitioned
+ - Erratic behaviour when tree partitions made with
+ multiple cDNA/Protein split views
+
+
+ |
+
+
+
+
+ |
+ General
+
+ - Updated Spanish translations of localized text for
+ 2.9
+ Application
+
+
+ - Signed OSX InstallAnywhere installer
+ - Support for per-sequence based annotations in BioJSON
+ Applet
+
+ - Split frame example added to applet examples page
+ |
+
+
+ General
+
+ - Mapping of cDNA to protein in split frames
+ incorrect when sequence start > 1
+ - Broken images in filter column by annotation dialog
+ documentation
+ - Feature colours not parsed from features file
+ - Exceptions and incomplete link URLs recovered when
+ loading a features file containing HTML tags in feature
+ description
+
+
+ Application
+
+ - Annotations corrupted after BioJS export and
+ reimport
+ - Incorrect sequence limits after Fetch DB References
+ with 'trim retrieved sequences'
+ - Incorrect warning about deleting all data when
+ deleting selected columns
+ - Patch to build system for shipping properly signed
+ JNLP templates for webstart launch
+ - EMBL-PDBe fetcher/viewer dialogs do not offer
+ unreleased structures for download or viewing
+ - Tab/space/return keystroke operation of EMBL-PDBe
+ fetcher/viewer dialogs works correctly
+ - Disabled 'minimise' button on Jalview windows
+ running on OSX to workaround redraw hang bug
+ - Split cDNA/Protein view position and geometry not
+ recovered from jalview project
+ - Initial enabled/disabled state of annotation menu
+ sorter 'show autocalculated first/last' corresponds to
+ alignment view
+ - Restoring of Clustal, RNA Helices and T-Coffee
+ color schemes from BioJSON
+
+ Applet
+
+ - Reorder sequences mirrored in cDNA/Protein split
+ frame
+ - Applet with Jmol examples not loading correctly
+
+
+ |
+
+
|
@@ -280,27 +404,6 @@
-
-
- |
-
-
- |
-
-
-
- - Reinstated the display of default example file on
- startup
- - All pairs shown in Jalview window when viewing
- result of pairwise alignment
-
-
- |
-
-
|
@@ -606,7 +709,7 @@
|
@@ -1245,6 +1348,7 @@
- URL links generated from description line for
regular-expression based URL links (applet and application)
+
- Non-positional feature URL links are shown in link
menu
@@ -1288,10 +1392,7 @@
between different screens.
- New preference items for sequence ID tooltip and
consensus annotation
- - Client to submit sequences and IDs to Envision2
- Workflows
-
+ - Client to submit sequences and IDs to Envision2 Workflows
- Vamsas Capabilities
- Improved VAMSAS synchronization (Jalview archive
@@ -1699,6 +1800,7 @@
- Cancel button for DAS Feature Fetching
- PCA and PDB Viewers zoom via mouse roller
- User-defined sub-tree colours and sub-tree selection
+
- 'New Window' button on the 'Output to Text box'
@@ -1713,6 +1815,7 @@
- Fixed Remove Empty Columns Bug (empty columns at end
of alignment)
- Slowed DAS Feature Fetching for increased robustness.
+
- Made angle brackets in ASCII feature descriptions
display correctly
@@ -1724,6 +1827,7 @@
- WsDbFetch query/result association resolved
- Tree leaf to sequence mapping improved
- Smooth fonts switch moved to FontChooser dialog box.
+
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