X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=help%2Fhtml%2FwebServices%2Fmsaclient.html;h=83a7249e70cf3f5291de4179743de20591032359;hb=3b94f01f4edf56896ae3b5f0ce6cb4f1996e7bbc;hp=5736258ce83328b5082b4ef68cbdfbca2d9e1a5b;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git

diff --git a/help/html/webServices/msaclient.html b/help/html/webServices/msaclient.html
index 5736258..83a7249 100644
--- a/help/html/webServices/msaclient.html
+++ b/help/html/webServices/msaclient.html
@@ -1,14 +1,14 @@
 <html>
 <!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
+ * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
  * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
+ *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
@@ -47,13 +47,13 @@ available:
 	<a href="webServicesParams.html">'Edit Settings And Run ..' dialog
 		box</a>.
 	</p>
-	<p><strong>Alignment programs supported by JABAWS</strong><ul>
-	<li><a href="http://www.clustal.org/">ClustalW</a> (version 2.0.12)</li>
-  <li><a href="http://align.bmr.kyushu-u.ac.jp/mafft/software/">Mafft</a> (version 6.713)</li>
-  <li><a href="http://www.drive5.com/muscle">Muscle</a> (version 3.7) </li>
-  <li><a href="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html">Tcoffee</a> (version 8.14) </li>
+	<p><strong>Alignment programs supported by JABAWS</strong>. <br/>Versions shown are those bundled with JABAWS 2.01 - if you are using a different server, check its home page to find out which versions are provided.<ul>
+  <li><a href="http://www.clustal.org/">Clustal Omega and Clustal W</a> (version 2.0.12)</li>
+  <li><a href="http://align.bmr.kyushu-u.ac.jp/mafft/software/">Mafft</a> (version 6.8.57b)</li>
+  <li><a href="http://www.drive5.com/muscle">Muscle</a> (version 3.8.31) </li>
+  <li><a href="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html">Tcoffee</a> (version 8.99) </li>
   <li><a href="http://probcons.stanford.edu/">Probcons</a> (version 1.12)</li>
-  </ul>
+	</ul>
 </p>
 
 <p><strong>Multiple Alignments of Sequences with hidden
