X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=resources%2Flang%2FMessages.properties;h=614af4625e4adfe44209076b9d864fe228f41ec4;hb=407387056950213aa8a06321ad05a90bbe1e460b;hp=f280d667e42f7a9b367cc3754e752d09afea5b1c;hpb=072176426bbe5af5d6588b3a6eb6d5969fe1b01e;p=jalview.git diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties index f280d66..614af46 100644 --- a/resources/lang/Messages.properties +++ b/resources/lang/Messages.properties @@ -32,9 +32,18 @@ action.load_project = Load Project action.save_project = Save Project action.save_project_as = Save Project as... action.quit = Quit -action.force_quit = Force Quit -label.quit_jalview = Quit Jalview? -label.save_in_progress = Some files are still saving. +action.force_quit = Force quit +label.quit_jalview = Are you sure you want to quit Jalview? +label.wait_for_save = Wait for save +label.unsaved_changes = There are unsaved changes. +label.unsaved_alignments = There are unsaved alignments. +label.save_in_progress = Some files are still saving: +label.confirm_quit_viewer = An external viewer is still open. Close the external window as well? +label.confirm_quit_viewers = External viewers are still open. Close these external windows as well? +label.unknown = Unknown +label.quit_after_saving = Jalview will quit after saving. +label.all_saved = All files saved. +label.quitting_bye = Quitting, bye! action.wait = Wait action.cancel_quit = Cancel quit action.expand_views = Expand Views @@ -87,7 +96,7 @@ action.scale_right = Scale Right action.by_tree_order = By Tree Order action.sort = Sort action.calculate_tree = Calculate Tree... -action.calculate_tree_pca = Calculate Tree or PCA... +action.calculate_tree_pca = Calculate Tree, PCA or PaSiMap... action.help = Help action.by_annotation = By Annotation... action.invert_sequence_selection = Invert Sequence Selection @@ -134,6 +143,8 @@ action.calculate = Calculate action.select_all = Select all action.select_highlighted_columns = Select Highlighted Columns tooltip.select_highlighted_columns = Press B to mark highlighted columns, Ctrl-(or Cmd)-B to toggle, and Alt-B to mark all but highlighted columns +action.copy_highlighted_regions = Copy Highlighted Regions +tooltip.copy_highlighted_regions = Copies highlighted sequence regions to the clipboard for export or further analysis action.deselect_all = Deselect all action.invert_selection = Invert selection action.using_jmol = Using Jmol @@ -174,6 +185,7 @@ label.amend = Amend label.undo_command = Undo {0} label.redo_command = Redo {0} label.principal_component_analysis = Principal Component Analysis +label.pasimap = PaSiMap label.average_distance_identity = Average Distance Using % Identity label.neighbour_joining_identity = Neighbour Joining Using % Identity label.choose_calculation = Choose Calculation @@ -205,13 +217,14 @@ label.colourScheme_turnpropensity = Turn Propensity label.colourScheme_buriedindex = Buried Index label.colourScheme_purine/pyrimidine = Purine/Pyrimidine label.colourScheme_nucleotide = Nucleotide +label.colourScheme_nucleotideambiguity = Nucleotide Ambiguity label.colourScheme_t-coffeescores = T-Coffee Scores label.colourScheme_rnahelices = By RNA Helices label.colourScheme_sequenceid = Sequence ID Colour -label.colourScheme_gecos\:flower = gecos Flower -label.colourScheme_gecos\:blossom = gecos Blossom -label.colourScheme_gecos\:sunset = gecos Sunset -label.colourScheme_gecos\:ocean = gecos Ocean +label.colourScheme_gecos-flower = gecos Flower +label.colourScheme_gecos-blossom = gecos Blossom +label.colourScheme_gecos-sunset = gecos Sunset +label.colourScheme_gecos-ocean = gecos Ocean label.blc = BLC label.fasta = Fasta label.msf = MSF @@ -437,6 +450,7 @@ label.input_cut_paste_params = Cut & Paste Input - {0} label.alignment_output_command = Alignment output - {0} label.annotations = Annotations label.structure_options = Structure Options +label.structure_import_options = Structure Import Options label.features = Features label.overview_params = Overview {0} label.paste_newick_file = Paste Newick file @@ -446,6 +460,7 @@ label.selection_output_command = Selection output - {0} label.annotation_for_displayid =
label.pdb_sequence_mapping = PDB - Sequence Mapping
label.pca_details = PCA details
+label.pasimap_details = PaSiMap details
label.redundancy_threshold_selection = Redundancy threshold selection
label.user_defined_colours = User defined colours
label.jalviewLite_release = JalviewLite - Release {0}
@@ -505,6 +520,7 @@ label.delete_gaps = Delete {0} gaps
label.sequence_details = Sequence Details
label.viewer_help = {0} Help
label.close_viewer = Close Viewer
+label.close_viewers = Close Viewers
label.confirm_close_viewer = This will close Jalview''s connection to {0}.
Do you want to close the {1} window as well?
label.all = All
label.sort_by = Sort alignment by
@@ -540,6 +556,7 @@ label.select_colour_maximum_value = Select Colour for Maximum Value
label.open_url_param = Open URL {0}
label.open_url_seqs_param = Open URL ({0}..) ({1} seqs)
label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0}
+label.load_pae_matrix_file_associate_with_structure = Load a PAE matrix file and associate it with structure {0}
label.reveal_hidden_columns = Reveal Hidden Columns with Right Mouse Button
label.dark_colour = Dark Colour
label.light_colour = Light Colour
@@ -688,12 +705,13 @@ label.sequence_details_for = Sequence Details for {0}
label.sequence_name = Sequence Name
label.sequence_description = Sequence Description
label.edit_sequence_name_description = Edit Sequence Name/Description
-label.spaces_converted_to_underscores = Spaces have been converted to _
+label.spaces_converted_to_underscores = Spaces have been converted to underscores (_)
label.no_spaces_allowed_sequence_name = No spaces allowed in Sequence Name
label.select_outline_colour = Select Outline Colour
label.web_browser_not_found_unix = Unixers\: Couldn't find default web browser.\nAdd the full path to your browser in Preferences."
label.web_browser_not_found = Web browser not found
label.select_pdb_file_for = Select a PDB file for {0}
+label.select_pae_matrix_file_for = Select a PAE matrix file for {0}
label.html = HTML
label.wrap = Wrap
label.show_database_refs = Show Database Refs
@@ -1007,6 +1025,8 @@ label.add_new_sbrs_service = Add a new Simple Bioinformatics Rest Service
label.edit_sbrs_entry = Edit Simple Bioinformatics Rest Service entry
label.pca_recalculating = Recalculating PCA
label.pca_calculating = Calculating PCA
+label.pasimap_recalculating = Recalculating PaSiMap
+label.pasimap_calculating = Calculating PaSiMap
label.select_foreground_colour = Choose foreground colour
label.select_colour_for_text = Select Colour for Text
label.adjust_foreground_text_colour_threshold = Adjust Foreground Text Colour Threshold
@@ -1333,6 +1353,7 @@ label.annotation_description = Annotation Description
label.edit_annotation_name_description = Edit Annotation Name/Description
label.alignment = alignment
label.pca = PCA
+label.pasimap = PaSiMap
label.create_image_of = Create {0} image of {1}
label.click_to_edit = Click to edit, right-click for menu
label.backupfiles_confirm_delete = Confirm delete
@@ -1402,6 +1423,8 @@ label.click_to_edit = Click to edit, right-click for menu
label.by_annotation_tooltip = Annotation Colour is configured from the main Colour menu
label.show_linked_features = Show {0} features
label.on_top = on top
+label.include_features = Include Features
+label.search_features = Search descriptions of displayed features
label.include_linked_features = Include {0} features
label.include_linked_tooltip = Include visible {0} features
converted to local sequence coordinates
label.features_not_shown = {0} feature(s) not shown
@@ -1410,6 +1433,7 @@ label.ignore_hidden = Ignore hidden columns
label.ignore_hidden_tooltip = Ignore any characters in hidden columns when matching
label.log_level = Log level
label.log_level_tooltip = Temporarily set the log level for this console. The log level will revert to {0} when this Java console is closed.
+label.copy = Copy
label.copy_to_clipboard = Copy to clipboard
label.copy_to_clipboard_tooltip = Copy all of the log text in this console to the system clipboard
label.startup = Startup
@@ -1425,3 +1449,22 @@ label.memory_example_text = Maximum memory that would be used with these setting
label.memory_example_tooltip = The memory allocated to Jalview is the smaller of the percentage of physical memory (default 90%) and the maximum absolute memory (default 32GB). If your computer's memory cannot be ascertained then the maximum absolute memory defaults to 8GB (if not customised).
Jalview will always try and reserve 512MB for the OS and at least 512MB for itself.
warning.wrong_jvm_version_title = Wrong Java Version
warning.wrong_jvm_version_message = The Java version being used (Java {0}) may lead to problems.\nThis installation of Jalview should be used with Java {1}.
+label.alphafold_reliability = Alphafold Reliability
+label.tftype_default = Default
+label.tftype_plddt = pLDDT
+label.optional = (optional)
+label.choose_tempfac_type = Choose Temperature Factor type
+label.interpret_tempfac_as = Interpret Temperature Factor as
+label.add_pae_matrix_file = Add PAE matrix file
+label.nothing_selected = Nothing selected
+prompt.analytics_title = Jalview Usage Statistics
+prompt.analytics = Do you want to help make Jalview better by enabling the collection of usage statistics with Plausible analytics?\nYou can enable or disable usage tracking in the preferences.
+label.working_ellipsis = Working ...
+action.show_groups_on_matrix = Show groups on matrix
+action.show_groups_on_matrix_tooltip = When enabled, clusters defined on the matrix's associated tree or below the assigned threshold are shown as different colours on the matrix annotation row
+action.show_tree_for_matrix = Show tree for matrix
+action.show_tree_for_matrix_tooltip = Opens a tree viewer to display the average distance tree for the matrix
+action.cluster_matrix = Cluster matrix
+action.clustering_matrix_for = Calculating tree for matrix {0} and clustering at {1}
+action.cluster_matrix_tooltip = Computes an average distance tree for the matrix and displays it
+