X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=resources%2Flang%2FMessages.properties;h=6f47422dfa347d3d946413abae45d84da321144b;hb=839db4a2e67d4b250e079511d51444d64237d3f4;hp=cabee76077e3ff570cac6211df2e401e10f4f67f;hpb=5720f2cea034f014f366886b3cb9a170a909e988;p=jalview.git diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties index cabee76..6f47422 100644 --- a/resources/lang/Messages.properties +++ b/resources/lang/Messages.properties @@ -57,8 +57,10 @@ action.by_pairwise_id = by Pairwise Identity action.by_id = by Id action.by_length = by Length action.by_group = by Group +action.unmark_as_reference = Unmark as Reference +action.set_as_reference = Set as Reference action.remove = Remove -action.remove_redundancy = Remove Redundancy +action.remove_redundancy = Remove Redundancy... action.pairwise_alignment = Pairwise Alignments... action.by_rna_helixes = by RNA Helices action.user_defined = User Defined... @@ -231,9 +233,13 @@ label.all_columns = All Columns label.all_sequences = All Sequences label.selected_columns = Selected Columns label.selected_sequences = Selected Sequences +label.except_selected_sequences = All except selected sequences label.all_but_selected_region = All but Selected Region (Shift+Ctrl+H) label.selected_region = Selected Region label.all_sequences_columns = All Sequences and Columns +label.hide_insertions = Hide columns gapped for selection +label.hide_selected_annotations = Hide selected annotations +label.show_selected_annotations = Show selected annotations label.group_consensus = Group Consensus label.group_conservation = Group Conservation label.show_consensus_histogram = Show Consensus Histogram @@ -251,6 +257,7 @@ label.structure_viewer = Default structure viewer label.chimera_path = Path to Chimera program label.chimera_path_tip = Jalview will first try any path entered here, else standard installation locations.
Double-click to browse for file. label.invalid_chimera_path = Chimera path not found or not executable +label.chimera_missing = Chimera structure viewer not found.
Please enter the path to Chimera (if installed),
or download and install UCSF Chimera. label.min_colour = Minimum Colour label.max_colour = Maximum Colour label.use_original_colours = Use Original Colours @@ -379,6 +386,7 @@ label.automatically_associate_pdb_files_with_sequences_same_name = Do you want t label.automatically_associate_pdb_files_by_name = Automatically Associate PDB files by name label.ignore_unmatched_dropped_files_info = Do you want to ignore the {0} files whose names did not match any sequence IDs ? label.ignore_unmatched_dropped_files = Ignore unmatched dropped files? +label.view_name_original = Original label.enter_view_name = Enter View Name label.enter_label = Enter label label.enter_label_for_the_structure = Enter a label for the structure? @@ -438,8 +446,8 @@ label.redundancy_threshold_selection = Redundancy threshold selection label.user_defined_colours = User defined colours label.jalviewLite_release = JalviewLite - Release {0} label.jaview_build_date = Build date: {0} -label.jalview_authors_1 = Authors: : Jim Procter, Andrew Waterhouse, Lauren Lui, Jan Engelhardt, Natasha Sherstnev, -label.jalview_authors_2 = Daniel Barton, Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton. +label.jalview_authors_1 = Authors: Jim Procter, Andrew Waterhouse, Mungo Carstairs, Tochukwu Ofoegbu, Lauren Lui, Jan Engelhardt, +label.jalview_authors_2 = Natasha Sherstnev, Daniel Barton, Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton. label.jalview_dev_managers = Development managed by The Barton Group, University of Dundee, Scotland, UK. label.jalview_distribution_lists = For help, see the FAQ at www.jalview.org and/or join the jalview-discuss@jalview.org mailing list label.jalview_please_cite = If you use Jalview, please cite: @@ -475,10 +483,8 @@ label.settings_for_type = Settings for {0} label.view_full_application = View in Full Application label.load_associated_tree = Load Associated Tree ... label.load_features_annotations = Load Features/Annotations ... -label.export_features = Export Features -label.export_annotations = Export Annotations -label.jalview_copy = Copy (Jalview Only) -label.jalview_cut = Cut (Jalview Only) +label.export_features = Export Features ... +label.export_annotations = Export Annotations ... label.to_upper_case = To Upper Case label.to_lower_case = To Lower Case label.toggle_case = Toggle Case @@ -594,7 +600,7 @@ label.figure_id_column_width = Figure ID column width label.use_modeller_output = Use Modeller Output label.wrap_alignment = Wrap Alignment label.right_align_ids = Right Align Ids -label.sequence_name_italics = Seq Name Italics +label.sequence_name_italics = Sequence Name Italics label.open_overview = Open Overview label.default_colour_scheme_for_alignment = Default Colour Scheme for alignment label.annotation_shading_default = Annotation Shading Default @@ -686,12 +692,26 @@ label.save_png_image = Save As PNG Image label.load_tree_for_sequence_set = Load a tree for this sequence set label.export_image = Export Image label.vamsas_store = VAMSAS store -label.translate_cDNA = Translate cDNA +label.translate_cDNA = Translate as cDNA +label.cdna = cDNA +label.link_cdna = Link cDNA +label.link_cdna_tip = Link to any compatible cDNA alignments.
Sequences are linked that have the same name and compatible lengths. +label.no_cdna = No compatible cDNA was found +label.linked_cdna = {0} cDNA alignments linked +label.cdna_all_linked = All {0} compatible cDNA alignments are already linked +label.align_cdna = Align linked cDNA +label.align_cdna_tip = Any linked cDNA sequences will be realigned to match this alignment. +label.cdna_aligned = {0} sequences in {1} alignments were realigned +label.view_as_cdna = Show aligned cDNA +label.view_as_cdna_tip = Open a new alignment of the related cDNA sequences +label.linked_view_title = Linked cDNA and protein view +label.align = Align label.extract_scores = Extract Scores label.get_cross_refs = Get Cross References label.sort_alignment_new_tree = Sort Alignment With New Tree label.add_sequences = Add Sequences label.new_window = New Window +label.split_window = Split Window label.refresh_available_sources = Refresh Available Sources label.use_registry = Use Registry label.add_local_source = Add Local Source @@ -731,6 +751,7 @@ label.paste_new_window = Paste To New Window label.settings_for_param = Settings for {0} label.view_params = View {0} label.select_all_views = Select all views +label.all_views = All Views label.align_sequences_to_existing_alignment = Align sequences to an existing alignment label.realign_with_params = Realign with {0} label.calcname_with_default_settings = {0} with Defaults @@ -1094,6 +1115,7 @@ warn.job_cannot_be_cancelled_close_window = This job cannot be cancelled.\nJust warn.service_not_supported = Service not supported! warn.input_is_too_big = Input is too big! warn.invalid_job_param_set = Invalid job parameter set! +warn.oneseq_msainput_selection = The current selection only contains a single sequence. Do you want to submit all sequences for alignment instead ? info.job_couldnt_be_run_server_doesnt_support_program = Job could not be run because the server doesn't support this program.\n{0} info.job_couldnt_be_run_exceeded_hard_limit = Job could not be run because it exceeded a hard limit on the server.\n{0} info.job_couldnt_be_run_incorrect_param_setting = Job could not be run because some of the parameter settings are not supported by the server.\n{0}\nPlease check to make sure you have used the correct parameter set for this service\!\n @@ -1103,6 +1125,8 @@ info.invalid_jnet_job_result_data ={0}\n{1}\nInvalid JNet job result data\!\n{2} info.failed_to_submit_sequences_for_alignment = Failed to submit sequences for alignment.\nIt is most likely that there is a problem with the server.\nJust close the window\n info.alignment_object_method_notes = \nAlignment Object Method Notes\n info.server_exception = \n{0} Server exception\!\n{1} +info.invalid_msa_input_mininfo = Need at least two sequences with at least 3 residues each, with no hidden regions between them. +info.invalid_msa_notenough = Not enough sequence data to align status.processing_commandline_args = Processing commandline arguments... status.das_features_being_retrived = DAS features being retrieved... status.searching_for_sequences_from = Searching for sequences from {0} @@ -1172,3 +1196,25 @@ label.show_logo = Show Logo label.normalise_logo = Normalise Logo label.no_colour_selection_in_scheme = Please, make a colour selection before to apply colour scheme label.no_colour_selection_warn = Error saving colour scheme +label.open_split_window? = Would you like to open as a split window, with cDNA and protein linked? +label.open_split_window = Open split window +label.no_mappings = No mappings found +label.mapping_failed = No sequence mapping could be made between the alignments.
A mapping requires sequence names to match, and equivalent sequence lengths. +action.no = No +action.yes = Yes +label.for = for +label.select_by_annotation = Select By Annotation +action.select_by_annotation = Select by Annotation... +label.threshold_filter = Threshold Filter +action.hide = Hide +action.select = Select +label.alpha_helix = Alpha Helix +label.beta_strand = Beta Strand +label.turn = Turn +label.select_all = Select All +label.structures_filter = Structures Filter +label.search_filter = Search Filter +label.display_name = Display Label +label.description = Description +label.include_description= Include Description +label.start_jalview = Start Jalview