X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2FMCview%2FPDBViewer.java;h=f5a9169a0a233a9ea60cca2f916526e21590fbeb;hb=80c223c45fde0899c9794e887801dd82fffd3452;hp=a5f050d19e8a8cd332efda32c45b46bfa3600cfd;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git

diff --git a/src/MCview/PDBViewer.java b/src/MCview/PDBViewer.java
index a5f050d..f5a9169 100755
--- a/src/MCview/PDBViewer.java
+++ b/src/MCview/PDBViewer.java
@@ -1,13 +1,13 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
+ * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
  * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
+ *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
@@ -26,10 +26,9 @@ import jalview.datamodel.*;
 import jalview.gui.*;
 import jalview.io.*;
 import jalview.schemes.*;
+import jalview.util.MessageManager;
 import jalview.ws.ebi.EBIFetchClient;
 
-import java.awt.BorderLayout;
-
 public class PDBViewer extends JInternalFrame implements Runnable
 {
 
@@ -52,7 +51,6 @@ public class PDBViewer extends JInternalFrame implements Runnable
 
   public PDBViewer(PDBEntry pdbentry, SequenceI[] seq, String[] chains,
           AlignmentPanel ap, String protocol)
-
   {
     this.pdbentry = pdbentry;
     this.seq = seq;
@@ -364,8 +362,8 @@ public class PDBViewer extends JInternalFrame implements Runnable
 
               int option = JOptionPane.showInternalConfirmDialog(
                       jalview.gui.Desktop.desktop,
-                      "Remove from default list?",
-                      "Remove user defined colour",
+                      MessageManager.getString("label.remove_from_default_list"),
+                      MessageManager.getString("label.remove_user_defined_colour"),
                       JOptionPane.YES_NO_OPTION);
               if (option == JOptionPane.YES_OPTION)
               {
@@ -685,6 +683,7 @@ public class PDBViewer extends JInternalFrame implements Runnable
           }
         }
         out.close();
+        in.close();
       } catch (Exception ex)
       {
         ex.printStackTrace();