X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fext%2Fedu%2Fucsf%2Frbvi%2Fstrucviz2%2Fport%2FListenerThreads.java;h=b08a919bdaa8a32e611a864938f613e30f988ec7;hb=58b30fcf2ee02b59666655a5bdf99d6e660b2e70;hp=379097c2076e9808341feeb888b5c6c2b898fca8;hpb=c311cb5524937effeac7cba95490060bd41f90bd;p=jalview.git

diff --git a/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java b/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java
index 379097c..b08a919 100644
--- a/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java
+++ b/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java
@@ -41,8 +41,10 @@ import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
 
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
+import ext.edu.ucsf.rbvi.strucviz2.Logger;
+
+//import org.slf4j.Logger;
+//import org.slf4j.LoggerFactory;
 
 import ext.edu.ucsf.rbvi.strucviz2.StructureManager;
 
@@ -61,7 +63,7 @@ public class ListenerThreads extends Thread
 
   private Map<String, List<String>> replyLog = null;
 
-  private Logger logger;
+  private Logger logger = new Logger();
 
   private StructureManager structureManager = null;
 
@@ -83,8 +85,8 @@ public class ListenerThreads extends Thread
     // Get a line-oriented reader
     InputStream readChan = chimera.getInputStream();
     lineReader = new BufferedReader(new InputStreamReader(readChan));
-    logger = LoggerFactory
-            .getLogger(ext.edu.ucsf.rbvi.strucviz2.port.ListenerThreads.class);
+    logger =new Logger();
+    //LoggerFactory.getLogger(ext.edu.ucsf.rbvi.strucviz2.port.ListenerThreads.class);
   }
 
   /**