X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fanalysis%2FAlignmentSorter.java;h=158fe8195dfd436e87e66350c9d29f09b39e42d0;hb=ec1ba9894335243c7b6af28f73d3c686a6e88903;hp=39af6490320efa7072e49f8fc5966c3087cb4565;hpb=d423f22792e47dbc800ae220a58677f988971d06;p=jalview.git diff --git a/src/jalview/analysis/AlignmentSorter.java b/src/jalview/analysis/AlignmentSorter.java index 39af649..158fe81 100755 --- a/src/jalview/analysis/AlignmentSorter.java +++ b/src/jalview/analysis/AlignmentSorter.java @@ -1,5 +1,5 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5) + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6) * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle * * This file is part of Jalview. @@ -798,9 +798,8 @@ public class AlignmentSorter // filter for selection criteria if ( // ignore features outwith alignment start-stop positions. - (sf[f].end < sstart || sf[f].begin > sstop) - || - // or ignore based on selection criteria + (sf[f].end < sstart || sf[f].begin > sstop) || + // or ignore based on selection criteria (featureLabels != null && !AlignmentSorter .containsIgnoreCase(sf[f].type, featureLabels)) || (groupLabels != null