X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fanalysis%2FAlignmentSorter.java;h=e960e638814bd4d957f6793c63dd00a4f8360f86;hb=7d6575e94bed92bc06043d432576e3a39e8a8e75;hp=4f7f2e2fefe06f88801fb3d98349790a0c039c4f;hpb=792a03fc1994671ae23e7263cefd51c9b0da53cb;p=jalview.git diff --git a/src/jalview/analysis/AlignmentSorter.java b/src/jalview/analysis/AlignmentSorter.java index 4f7f2e2..e960e63 100755 --- a/src/jalview/analysis/AlignmentSorter.java +++ b/src/jalview/analysis/AlignmentSorter.java @@ -607,7 +607,7 @@ public class AlignmentSorter .floatValue(); } - jalview.util.QuickSort.sortFloat(ids, alignment); + QuickSort.sortFloat(ids, alignment); } /** @@ -674,7 +674,7 @@ public class AlignmentSorter } } - jalview.util.QuickSort.sortDouble(scores, seqs); + QuickSort.sortDouble(scores, seqs); if (lastSortByScore != scoreLabel) { lastSortByScore = scoreLabel; @@ -854,7 +854,7 @@ public class AlignmentSorter labs[l] = (fs[l].getDescription() != null ? fs[l] .getDescription() : fs[l].getType()); } - jalview.util.QuickSort.sort(labs, ((Object[]) feats[i])); + QuickSort.sort(labs, ((Object[]) feats[i])); } } if (hasScore[i]) @@ -905,7 +905,7 @@ public class AlignmentSorter } } - jalview.util.QuickSort.sortDouble(scores, seqs); + QuickSort.sortDouble(scores, seqs); } else if (method == FEATURE_DENSITY) { @@ -922,7 +922,7 @@ public class AlignmentSorter // System.err.println("Sorting on Density: seq "+seqs[i].getName()+ // " Feats: "+nf+" Score : "+scores[i]); } - jalview.util.QuickSort.sortDouble(scores, seqs); + QuickSort.sortDouble(scores, seqs); } else {