X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fanalysis%2FGrouping.java;h=32ea204b73d39b539c0ecdae9aa2e6d3bf125f85;hb=a2207bf3ccb22ccd26719724bb9de964ddf24dce;hp=91fef84ae2cf23f71992e9f5edd7906010a380f1;hpb=b81d4d7d46ea8b1c89df086fb847baab6b69d427;p=jalview.git diff --git a/src/jalview/analysis/Grouping.java b/src/jalview/analysis/Grouping.java index 91fef84..32ea204 100644 --- a/src/jalview/analysis/Grouping.java +++ b/src/jalview/analysis/Grouping.java @@ -1,13 +1,13 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) + * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR @@ -17,12 +17,9 @@ */ package jalview.analysis; -import jalview.datamodel.AlignmentI; -import jalview.datamodel.SequenceFeature; import jalview.datamodel.SequenceGroup; import jalview.datamodel.SequenceI; -import java.util.Enumeration; import java.util.Hashtable; import java.util.List; import java.util.Vector; @@ -55,9 +52,9 @@ public class Grouping Hashtable pgroup = new Hashtable(); if (list != null) { - for (SequenceGroup sg:list) + for (SequenceGroup sg : list) { - for (SequenceI sq :sg.getSequences(null)) + for (SequenceI sq : sg.getSequences(null)) { pgroup.put(sq.toString(), sg); }