X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fappletgui%2FAnnotationLabels.java;h=ae47b722d1555e3f33554301a30b7b5ba7c8037c;hb=3b5ad2b93c9765e2f381ef66dc755184657d7d71;hp=1df7455c6aba0111161a6e2e183072b3e40e1a63;hpb=ee53965807b83bf93a21cbc341cee9a9e005b2cb;p=jalview.git

diff --git a/src/jalview/appletgui/AnnotationLabels.java b/src/jalview/appletgui/AnnotationLabels.java
index 1df7455..ae47b72 100755
--- a/src/jalview/appletgui/AnnotationLabels.java
+++ b/src/jalview/appletgui/AnnotationLabels.java
@@ -83,7 +83,7 @@ public class AnnotationLabels
     }
     else if (evt.getActionCommand().equals(OUTPUT_TEXT))
     {
-      CutAndPasteTransfer cap = new CutAndPasteTransfer(false, ap.alignFrame.applet);
+      CutAndPasteTransfer cap = new CutAndPasteTransfer(false, ap.alignFrame);
       Frame frame = new Frame();
       frame.add(cap);
       jalview.bin.JalviewLite.addFrame(frame,
@@ -181,14 +181,14 @@ public class AnnotationLabels
 
         x = width - fm.stringWidth(aa[i].label) - 3;
 
-        if (aa[i].isGraph)
+        if (aa[i].graph>0)
         {
           y += (aa[i].height / 3);
         }
 
         g.drawString(aa[i].label, x, y);
 
-        if (aa[i].isGraph)
+        if (aa[i].graph>0)
         {
           y += (2 * aa[i].height / 3);
         }