X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fappletgui%2FOverviewPanel.java;h=3301543bf1828f32b9ca9063a4c0aee97c78e353;hb=16bd1f9daaa35dd5b87de17a649116f9d33927b8;hp=2c2c41a52427846c6a714d40dcc662d577155f3d;hpb=47168f025aefdaa044802bd5f8f510ffe43a4808;p=jalview.git

diff --git a/src/jalview/appletgui/OverviewPanel.java b/src/jalview/appletgui/OverviewPanel.java
index 2c2c41a..3301543 100755
--- a/src/jalview/appletgui/OverviewPanel.java
+++ b/src/jalview/appletgui/OverviewPanel.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -69,7 +69,6 @@ public class OverviewPanel extends Panel implements Runnable,
     sr.renderGaps = false;
     sr.forOverview = true;
     fr = new FeatureRenderer(av);
-    fr.overview = true;
 
     // scale the initial size of overviewpanel to shape of alignment
     float initialScale = (float) av.getAlignment().getWidth()
@@ -229,10 +228,9 @@ public class OverviewPanel extends Panel implements Runnable,
       return;
     }
 
-    if (av.showSequenceFeatures)
+    if (av.isShowSequenceFeatures())
     {
-      fr.featureGroups = ap.seqPanel.seqCanvas.getFeatureRenderer().featureGroups;
-      fr.featureColours = ap.seqPanel.seqCanvas.getFeatureRenderer().featureColours;
+      fr.transferSettings(ap.seqPanel.seqCanvas.fr);
     }
 
     resizing = true;
@@ -260,7 +258,7 @@ public class OverviewPanel extends Panel implements Runnable,
     int alwidth = av.getAlignment().getWidth();
     int alheight = av.getAlignment().getHeight();
 
-    if (av.showSequenceFeatures)
+    if (av.isShowSequenceFeatures())
     {
       fr.transferSettings(ap.seqPanel.seqCanvas.getFeatureRenderer());
     }
@@ -337,7 +335,7 @@ public class OverviewPanel extends Panel implements Runnable,
         {
           color = sr.getResidueBoxColour(seq, lastcol);
 
-          if (av.showSequenceFeatures)
+          if (av.isShowSequenceFeatures())
           {
             color = fr.findFeatureColour(color, seq, lastcol);
           }