X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fbinding%2FSequenceSet.java;h=59151c830c4aed85440c07747c66f6cae4f4fe3a;hb=3ee0ddbd50e6a0fb9f04c00bf845288a5a137f2f;hp=c12934d95e2119b0378084d096dec34cdb3021d7;hpb=b57a02c25e335d033c97f8a6bacd6b54f62bd2b6;p=jalview.git

diff --git a/src/jalview/binding/SequenceSet.java b/src/jalview/binding/SequenceSet.java
index c12934d..59151c8 100644
--- a/src/jalview/binding/SequenceSet.java
+++ b/src/jalview/binding/SequenceSet.java
@@ -1,16 +1,31 @@
 /*
- * This class was automatically generated with 
- * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
- * Schema.
- * $Id$
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Copyright (C) 2014 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
-
 package jalview.binding;
 
 //---------------------------------/
 //- Imported classes and packages -/
 //---------------------------------/
 
+import jalview.util.MessageManager;
+
 import org.exolab.castor.xml.Marshaller;
 import org.exolab.castor.xml.Unmarshaller;
 
@@ -173,9 +188,11 @@ public class SequenceSet implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._annotationList.size())
     {
-      throw new IndexOutOfBoundsException("getAnnotation: Index value '"
-              + index + "' not in range [0.."
-              + (this._annotationList.size() - 1) + "]");
+        throw new IndexOutOfBoundsException(MessageManager.formatMessage("exception.index_value_not_in_range", new String[]{
+      		  "getAnnotation",
+      		  Integer.valueOf(index).toString(),
+      		  Integer.valueOf((this._annotationList.size() - 1)).toString()
+        })); 
     }
 
     return (jalview.binding.Annotation) _annotationList.get(index);
@@ -231,9 +248,11 @@ public class SequenceSet implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._sequenceList.size())
     {
-      throw new IndexOutOfBoundsException("getSequence: Index value '"
-              + index + "' not in range [0.."
-              + (this._sequenceList.size() - 1) + "]");
+        throw new IndexOutOfBoundsException(MessageManager.formatMessage("exception.index_value_not_in_range", new String[]{
+        		  "getSequence",
+        		  Integer.valueOf(index).toString(),
+        		  Integer.valueOf((this._sequenceList.size() - 1)).toString()
+          })); 
     }
 
     return (jalview.binding.Sequence) _sequenceList.get(index);
@@ -428,9 +447,11 @@ public class SequenceSet implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._annotationList.size())
     {
-      throw new IndexOutOfBoundsException("setAnnotation: Index value '"
-              + index + "' not in range [0.."
-              + (this._annotationList.size() - 1) + "]");
+        throw new IndexOutOfBoundsException(MessageManager.formatMessage("exception.index_value_not_in_range", new String[]{
+      		  "setAnnotation",
+      		  Integer.valueOf(index).toString(),
+      		  Integer.valueOf((this._annotationList.size() - 1)).toString()
+        })); 
     }
 
     this._annotationList.set(index, vAnnotation);
@@ -479,9 +500,11 @@ public class SequenceSet implements java.io.Serializable
     // check bounds for index
     if (index < 0 || index >= this._sequenceList.size())
     {
-      throw new IndexOutOfBoundsException("setSequence: Index value '"
-              + index + "' not in range [0.."
-              + (this._sequenceList.size() - 1) + "]");
+        throw new IndexOutOfBoundsException(MessageManager.formatMessage("exception.index_value_not_in_range", new String[]{
+        		  "setSequence",
+        		  Integer.valueOf(index).toString(),
+        		  Integer.valueOf((this._sequenceList.size() - 1)).toString()
+          })); 
     }
 
     this._sequenceList.set(index, vSequence);