X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fdatamodel%2FSecondaryStructureAnnotation.java;h=e39564846885d24249eda0b9d68f3135e5311b40;hb=a83adb45bdf9554e270921b4baad94defd314b36;hp=3bf46e4d9977960ce8c5386c3693847fb151bfca;hpb=838e4f91d4a53dd315640dbc9ff6ef7a815ee576;p=jalview.git diff --git a/src/jalview/datamodel/SecondaryStructureAnnotation.java b/src/jalview/datamodel/SecondaryStructureAnnotation.java index 3bf46e4..e395648 100644 --- a/src/jalview/datamodel/SecondaryStructureAnnotation.java +++ b/src/jalview/datamodel/SecondaryStructureAnnotation.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1) - * Copyright (C) 2015 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -25,7 +25,9 @@ import fr.orsay.lri.varna.models.rna.RNA; public class SecondaryStructureAnnotation extends AlignmentAnnotation { - private static RNA _rna = null; + // was static, but that cannot work here + + private RNA _rna = null; public SecondaryStructureAnnotation(RNA rna) { @@ -44,7 +46,7 @@ public class SecondaryStructureAnnotation extends AlignmentAnnotation Annotation[] ann = new Annotation[rna.getSize()]; for (int i = 0; i < ann.length; i++) { - ann[i] = new Annotation(_rna.getStructDBN(true), "", ' ', 0f); + ann[i] = new Annotation(rna.getStructDBN(true), "", ' ', 0f); ; } return ann;