X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fdatamodel%2FSequenceFeature.java;h=bbf1b4515595fdc5837e1384a47cb046259237e1;hb=08c7bee16c16563cc7cec7ea4d336b3e0c4c937a;hp=01574e1e7d650f8cc83fa18cdd36ebe6c3476245;hpb=de96de2488774840f2f6298d757369f9e43acaee;p=jalview.git
diff --git a/src/jalview/datamodel/SequenceFeature.java b/src/jalview/datamodel/SequenceFeature.java
index 01574e1..bbf1b45 100755
--- a/src/jalview/datamodel/SequenceFeature.java
+++ b/src/jalview/datamodel/SequenceFeature.java
@@ -612,10 +612,9 @@ public class SequenceFeature implements FeatureLocationI
String consequence = "";
if (mf != null)
{
- int[] beginRange = mf.getMappedPositions(begin, begin);
- int[] endRange = mf.getMappedPositions(end, end);
- int from = beginRange[0];
- int to = endRange[endRange.length - 1];
+ int[] localRange = mf.getMappedPositions(begin, end);
+ int from = localRange[0];
+ int to = localRange[localRange.length - 1];
String s = mf.isFromCds() ? "Peptide Location" : "Coding location";
sb.append(String.format(ROW_DATA, s, seqName, from == to ? from
: from + (isContactFeature() ? ":" : "-") + to));
@@ -639,7 +638,7 @@ public class SequenceFeature implements FeatureLocationI
if (!consequence.isEmpty())
{
sb.append(String.format(ROW_DATA, "Consequence",
- "Imputed by Jalview", consequence));
+ "Translated by Jalview", consequence));
}
if (otherDetails != null)