X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fdatamodel%2FUniprotEntry.java;h=e1a09eada636c81a18b746a6d72cf4a8a1ced604;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hp=bd2c37c9eb3bb238433ad023d609f72a9a9bdc14;hpb=506d60f0e188723ddc91c26824b41ac7034df3fe;p=jalview.git
diff --git a/src/jalview/datamodel/UniprotEntry.java b/src/jalview/datamodel/UniprotEntry.java
index bd2c37c..e1a09ea 100755
--- a/src/jalview/datamodel/UniprotEntry.java
+++ b/src/jalview/datamodel/UniprotEntry.java
@@ -1,56 +1,63 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
*
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
+ * This file is part of Jalview.
*
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.datamodel;
-import java.util.*;
+import java.util.Vector;
+/**
+ * Data model for an entry returned from a Uniprot query
+ *
+ * @see uniprot_mapping.xml
+ */
public class UniprotEntry
{
UniprotSequence sequence;
- Vector name;
+ Vector name;
- Vector accession;
+ Vector accession;
- Vector feature;
+ Vector feature;
- Vector dbrefs;
+ Vector dbrefs;
UniprotProteinName protName;
- public void setAccession(Vector items)
+ public void setAccession(Vector items)
{
accession = items;
}
- public void setFeature(Vector items)
+ public void setFeature(Vector items)
{
feature = items;
}
- public Vector getFeature()
+ public Vector getFeature()
{
return feature;
}
- public Vector getAccession()
+ public Vector getAccession()
{
return accession;
}
@@ -65,12 +72,12 @@ public class UniprotEntry
return protName;
}
- public void setName(Vector na)
+ public void setName(Vector na)
{
name = na;
}
- public Vector getName()
+ public Vector getName()
{
return name;
}
@@ -85,12 +92,12 @@ public class UniprotEntry
sequence = seq;
}
- public Vector getDbReference()
+ public Vector getDbReference()
{
return dbrefs;
}
- public void setDbReference(Vector dbref)
+ public void setDbReference(Vector dbref)
{
this.dbrefs = dbref;
}