X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Ffts%2Fapi%2FFTSRestClientI.java;h=13e73ef9f1e7df86efe7dee12c000d3c74f29a20;hb=daca035ea0a7379b3f5332aceb19bcb41f7038b3;hp=2266ca0340e66108eaf99d1fe3ccf7c3598ac11c;hpb=007af0c9001900071f6d8e9214143f79e10f4938;p=jalview.git

diff --git a/src/jalview/fts/api/FTSRestClientI.java b/src/jalview/fts/api/FTSRestClientI.java
index 2266ca0..13e73ef 100644
--- a/src/jalview/fts/api/FTSRestClientI.java
+++ b/src/jalview/fts/api/FTSRestClientI.java
@@ -22,6 +22,7 @@
 package jalview.fts.api;
 
 import jalview.fts.api.FTSDataColumnI.FTSDataColumnGroupI;
+import jalview.fts.core.FTSDataColumnPreferences.PreferenceSource;
 import jalview.fts.core.FTSRestRequest;
 import jalview.fts.core.FTSRestResponse;
 
@@ -74,7 +75,6 @@ public interface FTSRestClientI
   public FTSDataColumnI getDataColumnByNameOrCode(String nameOrCode)
           throws Exception;
 
-
   /**
    * Convert collection of FTSDataColumnI objects to a comma delimited string of
    * the 'code' values
@@ -87,9 +87,9 @@ public interface FTSRestClientI
   public String getDataColumnsFieldsAsCommaDelimitedString(
           Collection<FTSDataColumnI> wantedFields);
 
-
   /**
-   * Fetch index of the primary key column for the dynamic table
+   * Fetch index of the primary key column for the dynamic table TODO: consider
+   * removing 'hasRefSeq' - never used in code
    * 
    * @param wantedFields
    *          the available table columns
@@ -102,7 +102,7 @@ public interface FTSRestClientI
   public int getPrimaryKeyColumIndex(
           Collection<FTSDataColumnI> wantedFields, boolean hasRefSeq)
           throws Exception;
-          
+
   /**
    * Fetch the primary key data column object
    * 
@@ -115,7 +115,7 @@ public interface FTSRestClientI
    * 
    * @return list of columns to display by default
    */
-  public Collection<FTSDataColumnI> getAllDefaulDisplayedDataColumns();
+  public Collection<FTSDataColumnI> getAllDefaultDisplayedFTSDataColumns();
 
   /**
    * Return list of FTSDataColumnI objects that can be used to perform a search
@@ -138,5 +138,6 @@ public interface FTSRestClientI
    * @return the default response page size
    */
   public int getDefaultResponsePageSize();
-}
 
+  public String[] getPreferencesColumnsFor(PreferenceSource source);
+}