X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fgui%2FAssociatePdbFileWithSeq.java;h=b81c344197456608c24f594a9927e2e5336dd54d;hb=13ab52271b76b41ece153044b30316c23c4386a2;hp=08a68027257c94300601b1dde2ffbcbab935e708;hpb=ad1f4306281b0894fa42394b9a68da834cf14af6;p=jalview.git diff --git a/src/jalview/gui/AssociatePdbFileWithSeq.java b/src/jalview/gui/AssociatePdbFileWithSeq.java index 08a6802..b81c344 100644 --- a/src/jalview/gui/AssociatePdbFileWithSeq.java +++ b/src/jalview/gui/AssociatePdbFileWithSeq.java @@ -61,8 +61,8 @@ public class AssociatePdbFileWithSeq { PDBEntry entry = new PDBEntry(); StructureFile pdbfile = null; - pdbfile = Desktop.getStructureSelectionManager().setMapping(false, - new SequenceI[] + pdbfile = Desktop.getInstance().getStructureSelectionManager() + .setMapping(false, new SequenceI[] { sequence }, null, fileName, type); if (pdbfile == null) { @@ -84,7 +84,8 @@ public class AssociatePdbFileWithSeq entry.setType(PDBEntry.Type.FILE); entry.setFile(fileName); sequence.getDatasetSequence().addPDBId(entry); - Desktop.getStructureSelectionManager().registerPDBEntry(entry); + Desktop.getInstance().getStructureSelectionManager() + .registerPDBEntry(entry); return entry; } }