X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fgui%2FAssociatePdbFileWithSeq.java;h=f67d6da23f3b3edb09b81962647f506d15e1df9f;hb=9876fdccf311378e690c1f9e18db52675d427b89;hp=a854bdfc87f360e3c181e12241cbf58eb3046613;hpb=9c37999eb4b461a5c7a94e10ac39583c1c29200a;p=jalview.git

diff --git a/src/jalview/gui/AssociatePdbFileWithSeq.java b/src/jalview/gui/AssociatePdbFileWithSeq.java
index a854bdf..f67d6da 100644
--- a/src/jalview/gui/AssociatePdbFileWithSeq.java
+++ b/src/jalview/gui/AssociatePdbFileWithSeq.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -50,8 +50,8 @@ public class AssociatePdbFileWithSeq
     PDBEntry entry = new PDBEntry();
     MCview.PDBfile pdbfile = null;
     pdbfile = StructureSelectionManager.getStructureSelectionManager(ssmp)
-            .setMapping(false, new SequenceI[]
-            { sequence }, null, choice, protocol);
+            .setMapping(false, new SequenceI[] { sequence }, null, choice,
+                    protocol);
     if (pdbfile == null)
     {
       // stacktrace already thrown so just return
@@ -80,6 +80,7 @@ public class AssociatePdbFileWithSeq
     {
       entry.setId(pdbfile.id);
     }
+    entry.setType(PDBEntry.Type.FILE);
 
     if (pdbfile != null)
     {