X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fgui%2FFeatureSettings.java;h=77d562271eef83e33da2e03803c2ed51ded2893d;hb=7fb89dadbc3eac97602fc84e519014582abe4649;hp=33ab037bd132b1a5b3565bf99cf04a02bd7f5bc1;hpb=39b37500f9301122111be3239572f925ca18018e;p=jalview.git diff --git a/src/jalview/gui/FeatureSettings.java b/src/jalview/gui/FeatureSettings.java index 33ab037..77d5622 100644 --- a/src/jalview/gui/FeatureSettings.java +++ b/src/jalview/gui/FeatureSettings.java @@ -36,7 +36,6 @@ import jalview.io.JalviewFileView; import jalview.schemes.FeatureColour; import jalview.util.MessageManager; import jalview.util.Platform; -import jalview.util.dialogrunner.RunResponse; import jalview.viewmodel.seqfeatures.FeatureRendererModel.FeatureSettingsBean; import jalview.xml.binding.jalview.JalviewUserColours; import jalview.xml.binding.jalview.JalviewUserColours.Colour; @@ -99,7 +98,6 @@ import javax.swing.ToolTipManager; import javax.swing.border.Border; import javax.swing.event.ChangeEvent; import javax.swing.event.ChangeListener; -import javax.swing.plaf.TableUI; import javax.swing.table.AbstractTableModel; import javax.swing.table.TableCellEditor; import javax.swing.table.TableCellRenderer; @@ -210,6 +208,33 @@ public class FeatureSettings extends JPanel table = new JTable() { + +// @Override +// public void repaint() { +// System.out.println("FS repaint"); +// super.repaint(); +// +// } +// +// @Override +// public void repaint(long tm, int x, int y, int width, int height) { +// System.out.println("FS repaint " + x + " " + y + " " + width + " " + height); +// super.repaint(tm, x, y, width, height); +// +// } +// @Override +// public void invalidate() { +// if (isValid()) +// System.out.println("FS invalidating "); +// super.invalidate(); +// } +// +// @Override +// public void validate() { +// System.out.println("FS validating " + isValid()); +// super.validate(); +// } + @Override public String getToolTipText(MouseEvent e) { @@ -267,18 +292,18 @@ public class FeatureSettings extends JPanel table.getTableHeader().setFont(new Font("Verdana", Font.PLAIN, 12)); ToolTipManager.sharedInstance().registerComponent(table); - table.setDefaultEditor(FeatureColour.class, new ColorEditor(this)); + table.setDefaultEditor(FeatureColour.class, new ColorEditor()); table.setDefaultRenderer(FeatureColour.class, new ColorRenderer()); - table.setDefaultEditor(FeatureMatcherSet.class, new FilterEditor(this)); + table.setDefaultEditor(FeatureMatcherSet.class, new FilterEditor()); table.setDefaultRenderer(FeatureMatcherSet.class, new FilterRenderer()); TableColumn colourColumn = new TableColumn(COLOUR_COLUMN, 75, - new ColorRenderer(), new ColorEditor(this)); + new ColorRenderer(), new ColorEditor()); table.addColumn(colourColumn); TableColumn filterColumn = new TableColumn(FILTER_COLUMN, 75, - new FilterRenderer(), new FilterEditor(this)); + new FilterRenderer(), new FilterEditor()); table.addColumn(filterColumn); table.setSelectionMode(ListSelectionModel.SINGLE_SELECTION); @@ -342,7 +367,7 @@ public class FeatureSettings extends JPanel data[i + direction] = temp; } updateFeatureRenderer(data); - repaintTable(); + table.repaint(); selectedRow = newRow; } } @@ -417,44 +442,13 @@ public class FeatureSettings extends JPanel protected void showPopupMenu(final int rowSelected, final String type, final Object typeCol, final Point pt) { - final FeatureColourI featureColour = (FeatureColourI) typeCol; - JPopupMenu men = new JPopupMenu(MessageManager .formatMessage("label.settings_for_param", new String[] { type })); - JMenuItem scr = new JMenuItem( - MessageManager.getString("label.sort_by_score")); - men.add(scr); - final FeatureSettings me = this; - scr.addActionListener(new ActionListener() - { - - @Override - public void actionPerformed(ActionEvent e) - { - me.af.avc - .sortAlignmentByFeatureScore(Arrays.asList(new String[] - { type })); - } - }); - JMenuItem dens = new JMenuItem( - MessageManager.getString("label.sort_by_density")); - dens.addActionListener(new ActionListener() - { - - @Override - public void actionPerformed(ActionEvent e) - { - me.af.avc - .sortAlignmentByFeatureDensity(Arrays.asList(new String[] - { type })); - } - }); - men.add(dens); + final FeatureColourI featureColour = (FeatureColourI) typeCol; /* - * variable colour options include colour by label, by score, - * by selected attribute text, or attribute value + * menu option to select (or deselect) variable colour */ final JCheckBoxMenuItem variableColourCB = new JCheckBoxMenuItem( MessageManager.getString("label.variable_colour")); @@ -479,7 +473,7 @@ public class FeatureSettings extends JPanel /* * toggle simple colour to variable colour - show dialog */ - FeatureTypeSettings fc = new FeatureTypeSettings(me.fr, type); + FeatureTypeSettings fc = new FeatureTypeSettings(fr, type); fc.addActionListener(this); } else @@ -496,12 +490,13 @@ public class FeatureSettings extends JPanel table.setValueAt(new FeatureColour(c), rowSelected, COLOUR_COLUMN); table.validate(); - me.updateFeatureRenderer( + updateFeatureRenderer( ((FeatureTableModel) table.getModel()).getData(), false); } }; - JalviewColourChooser.showColourChooser(me, title, featureColour.getMaxColour(), listener); + JalviewColourChooser.showColourChooser(FeatureSettings.this, title, + featureColour.getMaxColour(), listener); } } else @@ -515,12 +510,41 @@ public class FeatureSettings extends JPanel FeatureColourI fci = fr.getFeatureColours().get(type); table.setValueAt(fci, rowSelected, COLOUR_COLUMN); // BH 2018 setting a table value does not invalidate it. - System.out.println("FeatureSettings is valied" + table.isValid()); -// table.validate(); +// System.out.println("FeatureSettings is valied" + table.isValid()); +// table.validate(); } } } }); + + men.addSeparator(); + + JMenuItem scr = new JMenuItem( + MessageManager.getString("label.sort_by_score")); + men.add(scr); + scr.addActionListener(new ActionListener() + { + + @Override + public void actionPerformed(ActionEvent e) + { + af.avc.sortAlignmentByFeatureScore(Arrays.asList(new String[] + { type })); + } + }); + JMenuItem dens = new JMenuItem( + MessageManager.getString("label.sort_by_density")); + dens.addActionListener(new ActionListener() + { + + @Override + public void actionPerformed(ActionEvent e) + { + af.avc.sortAlignmentByFeatureDensity(Arrays.asList(new String[] + { type })); + } + }); + men.add(dens); JMenuItem selCols = new JMenuItem( MessageManager.getString("label.select_columns_containing")); @@ -902,13 +926,15 @@ public class FeatureSettings extends JPanel chooser.setDialogTitle( MessageManager.getString("label.load_feature_colours")); chooser.setToolTipText(MessageManager.getString("action.load")); - chooser.addResponse(new RunResponse(JalviewFileChooser.APPROVE_OPTION){ - - @Override - public void run() { - File file = chooser.getSelectedFile(); - load(file); - }}); + chooser.setResponseHandler(0, new Runnable() + { + @Override + public void run() + { + File file = chooser.getSelectedFile(); + load(file); + } + }); chooser.showOpenDialog(this); } @@ -973,7 +999,7 @@ public class FeatureSettings extends JPanel .getData(); ensureOrder(data); updateFeatureRenderer(data, false); - repaintTable(); + table.repaint(); } } catch (Exception ex) { @@ -1087,7 +1113,7 @@ public class FeatureSettings extends JPanel data[i][SHOW_COLUMN] = !(Boolean) data[i][SHOW_COLUMN]; } updateFeatureRenderer(data, true); - repaintTable(); + table.repaint(); } public void orderByAvWidth() @@ -1153,29 +1179,6 @@ public class FeatureSettings extends JPanel table.repaint(); } - /** - * Repaints the table using alternative code for Java and J2S - */ - private void repaintTable() - { - table.repaint(); -// if (true) -// return; -// // BH 2018 -// // Here is a needed intervention -// // because generally we don't "repaint" -// // the table. We re-create the HTML divs -// // that is associated with it. A better -// // way to do this would be to fire a property change. -// @SuppressWarnings("unused") -// TableUI ui = table.getUI(); -// /** -// * @j2sNative ui.repaintTable$(); -// */ -// { -// } - } - public void close() { try @@ -1704,11 +1707,10 @@ public class FeatureSettings extends JPanel renderGraduatedColor(comp, gcol, w, h); } - class ColorEditor extends AbstractCellEditor + @SuppressWarnings("serial") +class ColorEditor extends AbstractCellEditor implements TableCellEditor, ActionListener { - FeatureSettings me; - FeatureColourI currentColor; FeatureTypeSettings chooser; @@ -1721,9 +1723,8 @@ public class FeatureSettings extends JPanel int rowSelected = 0; - public ColorEditor(FeatureSettings fs) + public ColorEditor() { - this.me = fs; // Set up the editor (from the table's point of view), // which is a button. // This button brings up the color chooser dialog, @@ -1755,7 +1756,7 @@ public class FeatureSettings extends JPanel public void colourSelected(Color c) { currentColor = new FeatureColour(c); - me.table.setValueAt(currentColor, rowSelected, COLOUR_COLUMN); + table.setValueAt(currentColor, rowSelected, COLOUR_COLUMN); fireEditingStopped(); } @Override @@ -1771,7 +1772,7 @@ public class FeatureSettings extends JPanel /* * variable colour and filters dialog */ - chooser = new FeatureTypeSettings(me.fr, type); + chooser = new FeatureTypeSettings(fr, type); if (!Jalview.isJS()) { chooser.setRequestFocusEnabled(true); @@ -1789,7 +1790,7 @@ public class FeatureSettings extends JPanel * update table data without triggering updateFeatureRenderer */ currentColor = fr.getFeatureColours().get(type); - FeatureMatcherSetI currentFilter = me.fr.getFeatureFilter(type); + FeatureMatcherSetI currentFilter = fr.getFeatureFilter(type); if (currentFilter == null) { currentFilter = new FeatureMatcherSet(); @@ -1798,13 +1799,26 @@ public class FeatureSettings extends JPanel .getData()[rowSelected]; data[COLOUR_COLUMN] = currentColor; data[FILTER_COLUMN] = currentFilter; - fireEditingStopped(); - me.table.validate(); + // SwingJS needs an explicit repaint() here, + // rather than relying upon no validation having + // occurred since the stopEditing call was made. + // Its laying out has not been stopped by the modal frame + table.validate(); + table.repaint(); } } - // Implement the one CellEditor method that AbstractCellEditor doesn't. + /** + * Override allows access to this method from anonymous inner classes + */ + @Override + protected void fireEditingStopped() + { + super.fireEditingStopped(); + } + + // Implement the one CellEditor method that AbstractCellEditor doesn't. @Override public Object getCellEditorValue() { @@ -1818,9 +1832,9 @@ public class FeatureSettings extends JPanel { currentColor = (FeatureColourI) value; this.rowSelected = row; - type = me.table.getValueAt(row, TYPE_COLUMN).toString(); + type = table.getValueAt(row, TYPE_COLUMN).toString(); button.setOpaque(true); - button.setBackground(me.getBackground()); + button.setBackground(FeatureSettings.this.getBackground()); if (!currentColor.isSimpleColour()) { JLabel btn = new JLabel(); @@ -1846,10 +1860,10 @@ public class FeatureSettings extends JPanel * as display text). On click in the cell, opens the Feature Display Settings * dialog at the Filters tab. */ - class FilterEditor extends AbstractCellEditor + @SuppressWarnings("serial") +class FilterEditor extends AbstractCellEditor implements TableCellEditor, ActionListener { - FeatureSettings me; FeatureMatcherSetI currentFilter; @@ -1863,9 +1877,8 @@ public class FeatureSettings extends JPanel int rowSelected = 0; - public FilterEditor(FeatureSettings me) + public FilterEditor() { - this.me = me; button = new JButton(); button.setActionCommand(EDIT); button.addActionListener(this); @@ -1880,7 +1893,7 @@ public class FeatureSettings extends JPanel { if (button == e.getSource()) { - FeatureTypeSettings chooser = new FeatureTypeSettings(me.fr, type); + FeatureTypeSettings chooser = new FeatureTypeSettings(fr, type); chooser.addActionListener(this); chooser.setRequestFocusEnabled(true); chooser.requestFocus(); @@ -1902,17 +1915,23 @@ public class FeatureSettings extends JPanel * update table data without triggering updateFeatureRenderer */ FeatureColourI currentColor = fr.getFeatureColours().get(type); - currentFilter = me.fr.getFeatureFilter(type); + currentFilter = fr.getFeatureFilter(type); if (currentFilter == null) { currentFilter = new FeatureMatcherSet(); } + Object[] data = ((FeatureTableModel) table.getModel()) .getData()[rowSelected]; data[COLOUR_COLUMN] = currentColor; data[FILTER_COLUMN] = currentFilter; fireEditingStopped(); - me.table.validate(); + // SwingJS needs an explicit repaint() here, + // rather than relying upon no validation having + // occurred since the stopEditing call was made. + // Its laying out has not been stopped by the modal frame + table.validate(); + table.repaint(); } } @@ -1928,9 +1947,9 @@ public class FeatureSettings extends JPanel { currentFilter = (FeatureMatcherSetI) value; this.rowSelected = row; - type = me.table.getValueAt(row, TYPE_COLUMN).toString(); + type = table.getValueAt(row, TYPE_COLUMN).toString(); button.setOpaque(true); - button.setBackground(me.getBackground()); + button.setBackground(FeatureSettings.this.getBackground()); button.setText(currentFilter.toString()); button.setIcon(null); return button;