X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fgui%2FFeatureTypeSettings.java;h=b3e6917354fecc9e87ddde3122f72d2edebff219;hb=5640ec0623c6d1205e62f9fe15292f32bfdab7d9;hp=327f6ca37ad000f4b78034680bc1d809d3e1e3df;hpb=c932f0e85a8852824cdd8ce790af68682732c85c;p=jalview.git

diff --git a/src/jalview/gui/FeatureTypeSettings.java b/src/jalview/gui/FeatureTypeSettings.java
index 327f6ca..b3e6917 100644
--- a/src/jalview/gui/FeatureTypeSettings.java
+++ b/src/jalview/gui/FeatureTypeSettings.java
@@ -204,20 +204,25 @@ public class FeatureTypeSettings extends JalviewDialog
 
   private JPanel chooseFiltersPanel;
 
+  public boolean originalDisplay;
+
   /**
    * Constructor
    * 
    * @param frender
    * @param theType
+   * @param last
+   *          - visibility of feature prior to adjustment
    */
-  public FeatureTypeSettings(FeatureRenderer frender, String theType)
+  public FeatureTypeSettings(FeatureRenderer frender, String theType,
+          boolean last)
   {
     this.fr = frender;
     this.featureType = theType;
     ap = fr.ap;
     originalFilter = fr.getFeatureFilter(theType);
     originalColour = fr.getFeatureColours().get(theType);
-
+    originalDisplay = last;
     adjusting = true;
 
     try
@@ -1032,6 +1037,10 @@ public class FeatureTypeSettings extends JalviewDialog
   {
     fr.setColour(featureType, originalColour);
     fr.setFeatureFilter(featureType, originalFilter);
+    if (!originalDisplay)
+    {
+      fr.getFeaturesDisplayed().setHidden(featureType);
+    }
     refreshDisplay(true);
   }