X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fgui%2FFeatureTypeSettings.java;h=c3887ff8ed3227366e77b6418f18c7fb8d615bc7;hb=a83adb45bdf9554e270921b4baad94defd314b36;hp=dac6bff5e074c14477ef150fdea2319f648c8faa;hpb=d6e18bfdbbc83b830c66280840a2e20a29b92e0b;p=jalview.git diff --git a/src/jalview/gui/FeatureTypeSettings.java b/src/jalview/gui/FeatureTypeSettings.java index dac6bff..c3887ff 100644 --- a/src/jalview/gui/FeatureTypeSettings.java +++ b/src/jalview/gui/FeatureTypeSettings.java @@ -39,6 +39,7 @@ import java.awt.BorderLayout; import java.awt.Color; import java.awt.Dimension; import java.awt.FlowLayout; +import java.awt.Graphics; import java.awt.GridLayout; import java.awt.event.ActionEvent; import java.awt.event.ActionListener; @@ -112,7 +113,7 @@ public class FeatureTypeSettings extends JalviewDialog */ final AlignmentViewPanel ap; - private final String featureType; + final String featureType; /* * the colour and filters to reset to on Cancel @@ -362,7 +363,7 @@ public class FeatureTypeSettings extends JalviewDialog : BELOW_THRESHOLD_OPTION); slider.setEnabled(true); slider.setValue((int) (fc.getThreshold() * scaleFactor)); - thresholdValue.setText(String.valueOf(getRoundedSliderValue())); + thresholdValue.setText(String.valueOf(fc.getThreshold())); thresholdValue.setEnabled(true); thresholdIsMin.setEnabled(true); } @@ -485,6 +486,7 @@ public class FeatureTypeSettings extends JalviewDialog graduatedColour = new JRadioButton( MessageManager.getString("label.by_range_of") + COLON); graduatedColour.setPreferredSize(new Dimension(RADIO_WIDTH, 20)); + graduatedColour.setOpaque(false); graduatedColour.addItemListener(new ItemListener() { @Override @@ -536,7 +538,8 @@ public class FeatureTypeSettings extends JalviewDialog { if (minColour.isEnabled()) { - showColourChooser(minColour, "label.select_colour_minimum_value"); + String ttl = MessageManager.getString("label.select_colour_minimum_value"); + showColourChooser(minColour, ttl); } } }); @@ -552,20 +555,28 @@ public class FeatureTypeSettings extends JalviewDialog { if (maxColour.isEnabled()) { - showColourChooser(maxColour, "label.select_colour_maximum_value"); + String ttl = MessageManager.getString("label.select_colour_maximum_value"); + showColourChooser(maxColour, ttl); } } }); maxColour.setBorder(new LineBorder(Color.black)); /* - * default max colour to last plain colour; - * make min colour a pale version of max colour + * if not set, default max colour to last plain colour, + * and make min colour a pale version of max colour */ - FeatureColourI fc = fr.getFeatureColours().get(featureType); - Color bg = fc.getColour() == null ? Color.BLACK : fc.getColour(); - maxColour.setBackground(bg); - minColour.setBackground(ColorUtils.bleachColour(bg, 0.9f)); + Color max = originalColour.getMaxColour(); + if (max == null) + { + max = originalColour.getColour(); + minColour.setBackground(ColorUtils.bleachColour(max, 0.9f)); + } + else + { + maxColour.setBackground(max); + minColour.setBackground(originalColour.getMinColour()); + } noValueCombo = new JComboBox<>(); noValueCombo.addItem(MessageManager.getString("label.no_colour")); @@ -648,6 +659,7 @@ public class FeatureTypeSettings extends JalviewDialog { thresholdValue .setText(String.valueOf(slider.getValue() / scaleFactor)); + thresholdValue.setBackground(Color.white); // to reset red for invalid sliderValueChanged(); } } @@ -728,6 +740,7 @@ public class FeatureTypeSettings extends JalviewDialog simpleColour = new JRadioButton( MessageManager.getString("label.simple_colour")); simpleColour.setPreferredSize(new Dimension(RADIO_WIDTH, 20)); + simpleColour.setOpaque(false); simpleColour.addItemListener(new ItemListener() { @Override @@ -743,16 +756,16 @@ public class FeatureTypeSettings extends JalviewDialog singleColour.setFont(JvSwingUtils.getLabelFont()); singleColour.setBorder(BorderFactory.createLineBorder(Color.black)); singleColour.setPreferredSize(new Dimension(40, 20)); - if (originalColour.isGraduatedColour()) - { - singleColour.setBackground(originalColour.getMaxColour()); - singleColour.setForeground(originalColour.getMaxColour()); - } - else - { + // if (originalColour.isGraduatedColour()) + // { + // singleColour.setBackground(originalColour.getMaxColour()); + // singleColour.setForeground(originalColour.getMaxColour()); + // } + // else + // { singleColour.setBackground(originalColour.getColour()); singleColour.setForeground(originalColour.getColour()); - } + // } singleColour.addMouseListener(new MouseAdapter() { @Override @@ -760,7 +773,8 @@ public class FeatureTypeSettings extends JalviewDialog { if (simpleColour.isSelected()) { - showColourChooser(singleColour, "label.select_colour"); + String ttl = MessageManager.formatMessage("label.select_colour_for", featureType); + showColourChooser(singleColour, ttl); } } }); @@ -778,6 +792,7 @@ public class FeatureTypeSettings extends JalviewDialog byCategory = new JRadioButton( MessageManager.getString("label.by_text_of") + COLON); byCategory.setPreferredSize(new Dimension(RADIO_WIDTH, 20)); + byCategory.setOpaque(false); byCategory.addItemListener(new ItemListener() { @Override @@ -828,10 +843,9 @@ public class FeatureTypeSettings extends JalviewDialog * * @param colourPanel * the panel whose background colour is being picked - * @param key - * message bundle key for the dialog title + * @param title */ - void showColourChooser(JPanel colourPanel, String key) + void showColourChooser(JPanel colourPanel, String title) { ColourChooserListener listener = new ColourChooserListener() { @@ -844,9 +858,8 @@ public class FeatureTypeSettings extends JalviewDialog colourChanged(true); } }; - JalviewColourChooser.showColourChooser(this, - MessageManager.getString(key), colourPanel.getBackground(), - listener); + JalviewColourChooser.showColourChooser(this, title, + colourPanel.getBackground(), listener); } /** @@ -891,42 +904,9 @@ public class FeatureTypeSettings extends JalviewDialog private FeatureColourI makeColourFromInputs() { /* - * easiest case - a single colour - */ - if (simpleColour.isSelected()) - { - return new FeatureColour(singleColour.getBackground()); - } - - /* - * next easiest case - colour by Label, or attribute text - */ - if (byCategory.isSelected()) - { - Color c = singleColour.getBackground(); - FeatureColourI fc = new FeatureColour(c); - fc.setColourByLabel(true); - String byWhat = (String) colourByTextCombo.getSelectedItem(); - if (!LABEL_18N.equals(byWhat)) - { - fc.setAttributeName( - FeatureMatcher.fromAttributeDisplayName(byWhat)); - } - return fc; - } - - /* - * remaining case - graduated colour by score, or attribute value + * min-max range is to (or from) threshold value if + * 'threshold is min/max' is selected */ - Color noColour = null; - if (noValueCombo.getSelectedIndex() == MIN_COLOUR_OPTION) - { - noColour = minColour.getBackground(); - } - else if (noValueCombo.getSelectedIndex() == MAX_COLOUR_OPTION) - { - noColour = maxColour.getBackground(); - } float thresh = 0f; try @@ -936,11 +916,6 @@ public class FeatureTypeSettings extends JalviewDialog { // invalid inputs are already handled on entry } - - /* - * min-max range is to (or from) threshold value if - * 'threshold is min/max' is selected - */ float minValue = min; float maxValue = max; int thresholdOption = threshold.getSelectedIndex(); @@ -954,14 +929,50 @@ public class FeatureTypeSettings extends JalviewDialog { maxValue = thresh; } + Color noColour = null; + if (noValueCombo.getSelectedIndex() == MIN_COLOUR_OPTION) + { + noColour = minColour.getBackground(); + } + else if (noValueCombo.getSelectedIndex() == MAX_COLOUR_OPTION) + { + noColour = maxColour.getBackground(); + } /* - * make the graduated colour + * construct a colour that 'remembers' all the options, including + * those not currently selected + */ + FeatureColourI fc = new FeatureColour(singleColour.getBackground(), + minColour.getBackground(), maxColour.getBackground(), noColour, + minValue, maxValue); + + /* + * easiest case - a single colour + */ + if (simpleColour.isSelected()) + { + ((FeatureColour) fc).setGraduatedColour(false); + return fc; + } + + /* + * next easiest case - colour by Label, or attribute text */ - FeatureColourI fc = new FeatureColour(minColour.getBackground(), - maxColour.getBackground(), noColour, minValue, maxValue); + if (byCategory.isSelected()) + { + fc.setColourByLabel(true); + String byWhat = (String) colourByTextCombo.getSelectedItem(); + if (!LABEL_18N.equals(byWhat)) + { + fc.setAttributeName( + FeatureMatcher.fromAttributeDisplayName(byWhat)); + } + return fc; + } /* + * remaining case - graduated colour by score, or attribute value; * set attribute to colour by if selected */ String byWhat = (String) colourByRangeCombo.getSelectedItem(); @@ -1029,21 +1040,23 @@ public class FeatureTypeSettings extends JalviewDialog { try { + /* + * set 'adjusting' flag while moving the slider, so it + * doesn't then in turn change the value (with rounding) + */ adjusting = true; float f = Float.parseFloat(thresholdValue.getText()); + f = Float.max(f, this.min); + f = Float.min(f, this.max); + thresholdValue.setText(String.valueOf(f)); slider.setValue((int) (f * scaleFactor)); threshline.value = f; thresholdValue.setBackground(Color.white); // ok - - /* - * force repaint of any Overview window or structure - */ - ap.paintAlignment(true, true); + adjusting = false; + colourChanged(true); } catch (NumberFormatException ex) { thresholdValue.setBackground(Color.red); // not ok - } finally - { adjusting = false; } } @@ -1191,6 +1204,8 @@ public class FeatureTypeSettings extends JalviewDialog andOrPanel.setBackground(Color.white); andFilters = new JRadioButton(MessageManager.getString("label.and")); orFilters = new JRadioButton(MessageManager.getString("label.or")); + andFilters.setOpaque(false); + orFilters.setOpaque(false); ActionListener actionListener = new ActionListener() { @Override @@ -1427,7 +1442,17 @@ public class FeatureTypeSettings extends JalviewDialog if (!patternField.isEnabled() || (pattern != null && pattern.trim().length() > 0)) { - JButton removeCondition = new JButton("\u2717"); // Dingbats cursive x + JButton removeCondition = new JButton("\u2717") + { + @Override + public void paint(Graphics g) + { + g.setColor(Color.black); + g.drawString("\u2717", 2, 14); // Dingbats cursive x + } + }; + removeCondition.setBackground(Color.WHITE); + removeCondition.setOpaque(true); removeCondition.setPreferredSize(new Dimension(23, 17)); removeCondition .setToolTipText(MessageManager.getString("label.delete_row"));