X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fgui%2FTextColourChooser.java;h=3ada67e468cf3e9306ceab5ea339d539c9e32fc8;hb=d053a3c980cf4318b9a19a255f9fc870e74de989;hp=ba9a9f9fc8d3a30bb7016bd13bc2a4ba5e58032b;hpb=797df64fa2a0a30773d0f48f5494d4155e5a8be3;p=jalview.git

diff --git a/src/jalview/gui/TextColourChooser.java b/src/jalview/gui/TextColourChooser.java
index ba9a9f9..3ada67e 100644
--- a/src/jalview/gui/TextColourChooser.java
+++ b/src/jalview/gui/TextColourChooser.java
@@ -188,12 +188,12 @@ public class TextColourChooser
 
   void setGroupTextColour()
   {
-    if (ap.av.alignment.getGroups() == null)
+    if (ap.av.getAlignment().getGroups() == null)
     {
       return;
     }
 
-    Vector groups = ap.av.alignment.getGroups();
+    Vector groups = ap.av.getAlignment().getGroups();
 
     for (int i = 0; i < groups.size(); i++)
     {