X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fio%2FBLCFile.java;h=66f9d8e322904308f1e9ef5e4df22ddd7ff3a941;hb=4924c107e70d763821067bcb3e1586bc14589918;hp=d0eb80ec8ee94db11ee41bb014bba76efed83fe8;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git
diff --git a/src/jalview/io/BLCFile.java b/src/jalview/io/BLCFile.java
index d0eb80e..66f9d8e 100755
--- a/src/jalview/io/BLCFile.java
+++ b/src/jalview/io/BLCFile.java
@@ -1,19 +1,22 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Copyright (C) 2014 The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.io;
@@ -142,7 +145,7 @@ public class BLCFile extends AlignFile
{
// header lines - keep them for the alignment comments.
headerLines.append(line);
- headerLines.append("\n");
+ headerLines.append(newline);
numHeaderLines++;
}
} while (!idsFound);
@@ -240,7 +243,7 @@ public class BLCFile extends AlignFile
out.append(" " + s[i].getDescription());
}
- out.append("\n");
+ out.append(newline);
if (s[i].getSequence().length > max)
{
@@ -250,7 +253,8 @@ public class BLCFile extends AlignFile
i++;
}
- out.append("* iteration 1\n");
+ out.append("* iteration 1");
+ out.append(newline);
for (int j = 0; j < max; j++)
{
@@ -270,10 +274,11 @@ public class BLCFile extends AlignFile
i++;
}
- out.append("\n");
+ out.append(newline);
}
- out.append("*\n");
+ out.append("*");
+ out.append(newline);
return out.toString();
}