X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fio%2FFileParse.java;h=0c46a17217a165451a1b52803c7157031dd407db;hb=5fafaa6e8d537c78f5bb2dfd4a9c33f468eb635b;hp=5f2e856de2a13b9ee32da8a7cb33028bb8b10ffe;hpb=1ecf6419aba86993b3c223bf5ec0fa79427baf85;p=jalview.git

diff --git a/src/jalview/io/FileParse.java b/src/jalview/io/FileParse.java
index 5f2e856..0c46a17 100755
--- a/src/jalview/io/FileParse.java
+++ b/src/jalview/io/FileParse.java
@@ -1,46 +1,63 @@
+/*
+* Jalview - A Sequence Alignment Editor and Viewer
+* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+*
+* This program is free software; you can redistribute it and/or
+* modify it under the terms of the GNU General Public License
+* as published by the Free Software Foundation; either version 2
+* of the License, or (at your option) any later version.
+*
+* This program is distributed in the hope that it will be useful,
+* but WITHOUT ANY WARRANTY; without even the implied warranty of
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+* GNU General Public License for more details.
+*
+* You should have received a copy of the GNU General Public License
+* along with this program; if not, write to the Free Software
+* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+*/
 package jalview.io;
 
 import java.io.*;
-import java.net.*;
-
-public class FileParse {
 
-  public File   inFile;
-  public int    fileSize;
-  public int    noLines;
-
-  protected String          type;
-  protected BufferedReader dataIn;
+import java.net.*;
 
-  public FileParse() {}
 
-  public FileParse(String fileStr, String type) throws MalformedURLException, IOException
-  {
+public class FileParse {
+    public File inFile;
+    public int fileSize;
+    public int noLines;
+    protected String type;
+    protected BufferedReader dataIn;
 
-    this.type = type;
+    public FileParse() {
+    }
 
-    if (type.equals("File")) {
-      this.inFile = new File(fileStr);
-      this.fileSize = (int)inFile.length();
+    public FileParse(String fileStr, String type)
+        throws MalformedURLException, IOException {
+        this.type = type;
+
+        if (type.equals("File")) {
+            this.inFile = new File(fileStr);
+            this.fileSize = (int) inFile.length();
+
+            dataIn = new BufferedReader(new FileReader(fileStr));
+        } else if (type.equals("URL")) {
+            URL url = new URL(fileStr);
+            this.fileSize = 0;
+            dataIn = new BufferedReader(new InputStreamReader(url.openStream()));
+        } else if (type.equals("Paste")) {
+            dataIn = new BufferedReader(new StringReader(fileStr));
+        }
+    }
 
-      dataIn = new BufferedReader(new FileReader( fileStr ));
+    public String nextLine() throws IOException {
+        String next = dataIn.readLine();
 
-    } else if (type.equals("URL")) {
-      URL url = new URL(fileStr);
-      this.fileSize = 0;
-      dataIn = new BufferedReader(new InputStreamReader( url.openStream() ));
-    } else if(type.equals("Paste"))
-    {
-      dataIn = new BufferedReader(new StringReader(fileStr));
-    }
-  }
+        if (next != null) {
+            noLines++;
+        }
 
-  public String nextLine() throws IOException {
-    String next = dataIn.readLine();
-    if (next != null) {
-      noLines++;
+        return next;
     }
-    return next;
-  }
-
 }